| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2189 |
|---|
| Symbol | |
|---|
| ID | 5209152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2693379 |
|---|
| End bp | 2694395 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640595791 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001276519 |
|---|
| Protein GI | 148656314 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.194534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCCC AACCTGTACG CACGGTGATG ATCGGATGTG GCGGCATGGC GCGTTACCAT
CTGCGCACCA TGTATGAACT ACGCGGCAGC ACGCAGATTG TTGCCGTATG CGAACCGTCG
CCATCCGCTT ATGAAGCCAC TGCTGCCCTC TTCGAGCAGG CTGGCGTCGC GCCGCCGCCC
AACGAGCCGG ACCTGGAGAA ACTCCTCGCG GAGTATCGCG GCAAACTGGA CGCAGCGTTC
ATCATCACGC CCCATGCCTA TCATCACAAT CAGGCAAAGG TATGCATGGA AGCCGGTCTC
GACGTGCTGC TCGAAAAACC AATGGTCATG AACGCCGACG AGGCGCTCAG CCTGATCGAA
ACCCGTGATC GCACCGGACG ATTGCTGGTG GTCGCGTTTC CTGGAAGCCT CTCGCCCAAT
GTGCGTACCG CTGTCGCACT GCTACGTTCC GGCGCATTCG GTCGTCTGCT GACGATCAGC
GGCGTCGTCT GGCAGAACTG GGGACCGATG ACCGTCGGTT CATGGCGACA GCAACCAGAG
TTGTCCGGCG GCGGGTTCCT GTTCGATACC GGCGCGCACC TGTTGAACAC CGTCGTCGAT
CTGGCAGGCG AGGATATCGC CGAGGTTGCG GCATACCTGG ACAATCAGGG GCGTCCGGTT
GAAACGCTGG GCACCGTCAT TGCACGCTTG CGGTCAGGGG CGTTGATCAC GCTGCATGCG
TGTGGCGAAG CCATTCCGTC GTGCCATTCG GACGTGCGGG TCTTCTGCGA GCGCGCCATT
CTGTACACCG GGGTCTGGGG CGAGCGGCTC GAGGTGCAGT ACAACGGCGA CAAACCGCCA
GCTGCGATCC CTGTGCCCGA ATCGCGCGGC GTATGGGAAC AGTTCCTGGC GGTACGCGCC
GGCAAACAGG AGAACCCATG CCCGCCGGAA GTGGGACTGC GGATGGCGCG TCTGTGGGAT
GCCATCCAGG CGTCGGCTGC GCGCGGCGGC GCATCGGTTC GTGTCGTTGA AGGTTGA
|
|---|
| Protein sequence | MAPQPVRTVM IGCGGMARYH LRTMYELRGS TQIVAVCEPS PSAYEATAAL FEQAGVAPPP
NEPDLEKLLA EYRGKLDAAF IITPHAYHHN QAKVCMEAGL DVLLEKPMVM NADEALSLIE
TRDRTGRLLV VAFPGSLSPN VRTAVALLRS GAFGRLLTIS GVVWQNWGPM TVGSWRQQPE
LSGGGFLFDT GAHLLNTVVD LAGEDIAEVA AYLDNQGRPV ETLGTVIARL RSGALITLHA
CGEAIPSCHS DVRVFCERAI LYTGVWGERL EVQYNGDKPP AAIPVPESRG VWEQFLAVRA
GKQENPCPPE VGLRMARLWD AIQASAARGG ASVRVVEG
|
|---|
| |