Gene RoseRS_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2172 
Symbol 
ID5209134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2672923 
End bp2673723 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content56% 
IMG OID640595773 
Producthypothetical protein 
Protein accessionYP_001276502 
Protein GI148656297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.517611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTAA CCGATGCCCA ACGACAAACA TTACTGACAG AACTGCGCGA GATGGGGCGC 
GCCTCCAGCG CCGAATTGGA AAGTGGGAAG CAGTTTCAAC GCGCCTTTTA CCCGGTCGCC
GAACATCTGC GCGTCTTTGA GCCAAACGTC AACCTGATCA TCGGCTATCA CGGCGCTGGC
AAAAGCATGC TCTTCAAAGC CGCCGTCGAG CAGCAGTTGT CTGCCAAAAT GATCCGCATG
CTGCCAGGGC GCGACTTGTT TCTTCACACC CTCGCAGAGG AGAAGGCTTC CTGGCTGGCA
GGCTACCCAA TGGGCGCCGC CTTTCCGGAT CCTGGCACGT TGCGTCAGTT CGTTCAACAC
CTTCCTGCTG GATGCGACAA TGCGCAGGCG CTGGCCGATC TGTGGCTGGC GTATCTGGCG
CGGTTGTTGC GCCAGGAACT TAACGTGAGC GATCTTCAAC CGCTGTTTGA ACTGGCCGCA
ACGGAAGTCA AACTGATTTA CGACACGTTG CAAGTCCAGC GCGCCACAGT CATCAAGGCG
TTAGATGCGC TGGATACTCG CCTGAAAAGA GAAAATCGCT GGGTGTTCAT CAATTACGAT
GAACTGGATA CCCTGGGTGG GGTGGATTGG GAACTGATGG CTGCCCTGAT TCGGGGGCTG
TTGACCTTTT GGTCTGAATA CGCGCGCCGC TGGCAACGCA TACAGCCCAA AATCTTTTTG
CGCAGCGATT TATACACCAA TACCCACATC TTTGCCGCCG ACCTGGCCAA ACTGGCGGCC
AGTCGCGTGG AATTGACCTA G
 
Protein sequence
MTLTDAQRQT LLTELREMGR ASSAELESGK QFQRAFYPVA EHLRVFEPNV NLIIGYHGAG 
KSMLFKAAVE QQLSAKMIRM LPGRDLFLHT LAEEKASWLA GYPMGAAFPD PGTLRQFVQH
LPAGCDNAQA LADLWLAYLA RLLRQELNVS DLQPLFELAA TEVKLIYDTL QVQRATVIKA
LDALDTRLKR ENRWVFINYD ELDTLGGVDW ELMAALIRGL LTFWSEYARR WQRIQPKIFL
RSDLYTNTHI FAADLAKLAA SRVELT