Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2172 |
Symbol | |
ID | 5209134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2672923 |
End bp | 2673723 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640595773 |
Product | hypothetical protein |
Protein accession | YP_001276502 |
Protein GI | 148656297 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.517611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTAA CCGATGCCCA ACGACAAACA TTACTGACAG AACTGCGCGA GATGGGGCGC GCCTCCAGCG CCGAATTGGA AAGTGGGAAG CAGTTTCAAC GCGCCTTTTA CCCGGTCGCC GAACATCTGC GCGTCTTTGA GCCAAACGTC AACCTGATCA TCGGCTATCA CGGCGCTGGC AAAAGCATGC TCTTCAAAGC CGCCGTCGAG CAGCAGTTGT CTGCCAAAAT GATCCGCATG CTGCCAGGGC GCGACTTGTT TCTTCACACC CTCGCAGAGG AGAAGGCTTC CTGGCTGGCA GGCTACCCAA TGGGCGCCGC CTTTCCGGAT CCTGGCACGT TGCGTCAGTT CGTTCAACAC CTTCCTGCTG GATGCGACAA TGCGCAGGCG CTGGCCGATC TGTGGCTGGC GTATCTGGCG CGGTTGTTGC GCCAGGAACT TAACGTGAGC GATCTTCAAC CGCTGTTTGA ACTGGCCGCA ACGGAAGTCA AACTGATTTA CGACACGTTG CAAGTCCAGC GCGCCACAGT CATCAAGGCG TTAGATGCGC TGGATACTCG CCTGAAAAGA GAAAATCGCT GGGTGTTCAT CAATTACGAT GAACTGGATA CCCTGGGTGG GGTGGATTGG GAACTGATGG CTGCCCTGAT TCGGGGGCTG TTGACCTTTT GGTCTGAATA CGCGCGCCGC TGGCAACGCA TACAGCCCAA AATCTTTTTG CGCAGCGATT TATACACCAA TACCCACATC TTTGCCGCCG ACCTGGCCAA ACTGGCGGCC AGTCGCGTGG AATTGACCTA G
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Protein sequence | MTLTDAQRQT LLTELREMGR ASSAELESGK QFQRAFYPVA EHLRVFEPNV NLIIGYHGAG KSMLFKAAVE QQLSAKMIRM LPGRDLFLHT LAEEKASWLA GYPMGAAFPD PGTLRQFVQH LPAGCDNAQA LADLWLAYLA RLLRQELNVS DLQPLFELAA TEVKLIYDTL QVQRATVIKA LDALDTRLKR ENRWVFINYD ELDTLGGVDW ELMAALIRGL LTFWSEYARR WQRIQPKIFL RSDLYTNTHI FAADLAKLAA SRVELT
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