| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2130 |
|---|
| Symbol | |
|---|
| ID | 5209092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2622683 |
|---|
| End bp | 2623508 |
|---|
| Gene Length | 826 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640595732 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_001276461 |
|---|
| Protein GI | 148656256 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGAC GTGCACTTCG ATCCTATCCA ACCAAGTATG CGACCGATCT GACCGATGCG
CAATGGGCCG CCATCGCGCC ACTCGTCATC ACCCCGTCGC CCAACGGCGG GCGTCCGACC
GAAATCGATC GCCGCGCGAT CGTCAACGCG CTGCTCTCCA AAAATCGCAC GGGCTGTCAA
TGGCGCATGC GTCCGAAAGA TGTTCCGCCA ATGAGCTCCG TTCGGTACTC TTTCGACAAA
TGGAATCGTG ATGGAACCTT TATCAAAATC AATGATACGC TGCGGAAACT GGCGCGACAG
GCGCTGAACC GCGACCCGGA GCCGTCCATC AGCGTCCTGG ACTCCCAATC CGTCAAAACG
ACCGAAGCAG GCGGAGAACG CGGCTATGAT GGGGGAAAAA AAGGTCAACG GGCGCAAACG
GCAGTTCTGG GTTGACACCA ATGGGTTTTT GTTGCGCGTG TTGGTCCATC CCGCCGATAT
TTCGGATACT GAAGGCGCTG AGTGGCTTCT CGCCGCGCAT CATCAATCGT TTCCTCGGAT
GCAAGAAATT CGGGTGGATG AAGGATACAA ACAAGGGTTA AATGAATGGA TGCAACAGAA
CACGACGATA CGCCTGAATG TCATCGAAAA ACCGCCTGGA CAAAAGGGAT TTGCCGTCAT
CCCGAAGCGA TGGGTGGTGG AACGCTCGAT TGCGTGGGCG GGACGCAATC GGTTGTTGCG
GCGAATAATT ATTCGCCGCA ACAACCGCAA TCCAGAATCA AGCGAAGCCT TTCTTTATCT
CGGTTCTATT GCAATGCTCC TGAATAGGCT TTATCCGAGG TGTTAG
|
|---|
| Protein sequence | MPRRALRSYP TKYATDLTDA QWAAIAPLVI TPSPNGGRPT EIDRRAIVNA LLSKNRTGCQ
WRMRPKDVPP MSSVRYSFDK WNRDGTFIKI NDTLRKLARQ ALNRDPEPSI SVLDSQSVKT
TEAGGERGYD GGKKVNGRKR QFWVDTNGFL LRVLVHPADI SDTEGAEWLL AAHHQSFPRM
QEIRVDEGYK QGLNEWMQQN TTIRLNVIEK PPGQKGFAVI PKRWVVERSI AWAGRNRLLR
RIIIRRNNRN PESSEAFLYL GSIAMLLNRL YPRC
|
|---|
| |