| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2074 |
|---|
| Symbol | |
|---|
| ID | 5209036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2565263 |
|---|
| End bp | 2566732 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640595678 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001276407 |
|---|
| Protein GI | 148656202 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.104517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.105314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGACAAA AATCCACATT GGTGGACACT TATCTACGGG CGCGATTGCT TGGCATGGTG
CTGGTGAACG TGAGCCTGGC GCTCCTGCTG GTCTTTCTGT ACCTTGGACT GCTTATCCTG
TTATCGCAGT TCGGGATCCG GGATCACGCA ACCCTGCATA TGCTGGCGTC GGTCGGGCTG
GCAGTTGCCG TCGTTCCGTT GCGACGACGG TTGGTGATAA TCAGCAACCA TCTCCTGCGC
CTGCGCTGGC AGGATAGCGA AGAAATCCTG CGTGAGTTCA GCGCTGCACT CAGCCGCACC
ATCGAGCCGG ACGCATTGCG CGCGCTCCTC ATCGATGATC TGCCAGGTCG ATTGCGATTG
TACAGCGCAA CGCTCTGGAT GCTCGAACCG CCGGATGACC ATGTGTTTGT CGCGCTTGGT
CAGGAGAAAC ATTTTCCCGG TGCAACCCTG CTGGCGCAGG GAGCGAGTGT GAACAAACTG
CGGCGCTGCG GTGAGTATGT GCGCATTCCA GCACACTCTG ACGATGAATG GGTCAAACCC
TTCGTGGCGC AGGGCGTAGG GCTTGCATTT CCGCTTCGCA TCGGCAGTCG CCTGGTGGGG
ATCTACGGAT GCGGCTGGTC GATGAGTCGA CGCGGATACT CACCCCAGAC GATCAGCCTG
CTCGTCACGC TGGCGCCGGC GGTCGCCAGC GCACTCGAGA ATACTCGCGC ATACACCGAA
ATTGCGCGCC TGAACAATCA ACTGCGTCGG CTCGATAAAC TGAAGGACGA ATTCATTGAG
CACGTCGGTC ACGAACTGCG CACGCCGGTC ACGAGCCTTT CTCTGGCACT GCAACTGCTG
ACGCGCCAAC CGGAACTGAT GCGCGAACTC ATCCACGTTG TACGCAACAG CATCCTGCAA
CTCGAGACGC TGGTCGACCG GGTGCTGCTG ATGGATCACG CGCTCGAAGA AACAGAAGAG
CGCCTGCATC GCGCCTCGTC ATCGATCGAA CTCCTTCCTT TGCTCGAAGA AATTGCCGAA
ACATTCATGC CAGCAGTGCG CGCAAAAGGG CTTCACCTGC ACGTCCAGGC GCCTGAAGGA
CTTGCAGTAT GGGGTGACGT CACCACGCTT CGTCATGCAC TGCACGAAGT CGTCGATAAC
GCCATCCGAT ACAGTGACGC TGGAACGGTG ACGATCACGG CATCCCTGCG TGATGGTCTT
GCCGTTATCA CTATCGAAGA TCAGGGTCCA GGCATTCCAC CCGAAGAGCA GGACTTGCTG
TTCAATGCGT TTTATCGCGG GCGCCGCACC CGTGCGCTGG CAGATCAACC CGGCGCAGGG
CTCGGACTGA GCCTGGCGCG TCGTGACGTC GAGGCTCTCG GCGGGCAGAT CTGGCTGGAA
CGCACTGGCA GTGACGGATC GGTTATGTGC ATCGCAGTAC CGGCAGTGGA ACTCTCGCAT
GAAGCAGTGG ACAGAGGTTC ATCGTCATAG
|
|---|
| Protein sequence | MGQKSTLVDT YLRARLLGMV LVNVSLALLL VFLYLGLLIL LSQFGIRDHA TLHMLASVGL
AVAVVPLRRR LVIISNHLLR LRWQDSEEIL REFSAALSRT IEPDALRALL IDDLPGRLRL
YSATLWMLEP PDDHVFVALG QEKHFPGATL LAQGASVNKL RRCGEYVRIP AHSDDEWVKP
FVAQGVGLAF PLRIGSRLVG IYGCGWSMSR RGYSPQTISL LVTLAPAVAS ALENTRAYTE
IARLNNQLRR LDKLKDEFIE HVGHELRTPV TSLSLALQLL TRQPELMREL IHVVRNSILQ
LETLVDRVLL MDHALEETEE RLHRASSSIE LLPLLEEIAE TFMPAVRAKG LHLHVQAPEG
LAVWGDVTTL RHALHEVVDN AIRYSDAGTV TITASLRDGL AVITIEDQGP GIPPEEQDLL
FNAFYRGRRT RALADQPGAG LGLSLARRDV EALGGQIWLE RTGSDGSVMC IAVPAVELSH
EAVDRGSSS
|
|---|
| |