Gene RoseRS_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2050 
Symbol 
ID5209012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2540883 
End bp2541602 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content60% 
IMG OID640595656 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001276385 
Protein GI148656180 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.285606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCGT GTCTTCTTCC ACTGAAAATC GAGCCTCGAA ATCCTTCGGT GAATATGCAG 
CATTTCCGGC GACGACTGGC AGAAGTGGCG CAGTATGCTC CCGATCTGAT CTGTTTGCCG
GAATGCGCAT TCACCGGGTA TCTGTATGAG CCACACGATC TCGAACAGTA TGCCAGGCCG
ATACCCGGTG AGACGACGTC GATAGTTGCG GCGCTGGCGA GGGCGTATCG CTGCGCCATC
TGCTTTGGGA TGCTGGAGCG CGCGGCGGAA GGGTGGTATA GTTCCGCCGT CCTGGTGGAA
CCATCCGGTC GTCTGGCGCT TGTTCAGCGC AAGATGAGCG AACAGCCTCC CCTTGCCGCC
GGTGACGACA TTCACATCGT GGATACGGCG GCTGGCAGGC TGGCGATCCT GATATGCGGC
GATCTGTTCG ATGAGCGTGC CCGGACGATG CTCGGCGCCC GCGCAGACAT TGTGGTTGTT
CCGCTGGCGC GCAGTTTCGA TGGAACATCC CCCGACACGG AGCGCTGGCT GCGTGAGGAG
CGTCAGGCAT ACGCGGATGC CGTCAGAACC CTGCAGGTGA CGGCGTTGAT CGTCAATGCA
CTGGAAGACC CCACGCAGCC CGAAGCATCA TTCGGCGGCG CAATGGTTGT CAGCCCGACA
GGTGACATCC TGGCCGAGTC GCCGCACGGC ACAGAAGATG CGTTGATCTT CGATGTTTAA
 
Protein sequence
MRACLLPLKI EPRNPSVNMQ HFRRRLAEVA QYAPDLICLP ECAFTGYLYE PHDLEQYARP 
IPGETTSIVA ALARAYRCAI CFGMLERAAE GWYSSAVLVE PSGRLALVQR KMSEQPPLAA
GDDIHIVDTA AGRLAILICG DLFDERARTM LGARADIVVV PLARSFDGTS PDTERWLREE
RQAYADAVRT LQVTALIVNA LEDPTQPEAS FGGAMVVSPT GDILAESPHG TEDALIFDV