Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2037 |
Symbol | |
ID | 5208999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2526899 |
End bp | 2528677 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595643 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_001276372 |
Protein GI | 148656167 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.509449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.192694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACA ACATTCTGGT CGCAGTTGCC TGGCCCTACG CTAACGGTCC GTTCCATGTC GGTCATATTG CGGGCGCGTA TCTGCCCGCC GATGTTTTCG CGCGCTACCA GCGCTTGCGC GGCAACCGGG TGCTGATGGT CTCCGGTTCT GACTGCCACG GGACGCCAAT CACCATCGCC GCCGAGCGTG AGGGTATTAC GCCGCAGGAT GTCATCCGAC GGTATCACCC GACGTTCCTT AAAACCTTCC AGACGCTCGG TATTTCGTTC GACCTGTTCA CGCAGACGTA TACCGACAAT CACTACCGGG TGACGACCGA TATCTTCCTG CGCTTGCTGG AAAACGGCTA TCTCTACAAG GAAACAATGG TCGGCTCGTA CTCTGAGACG CTGGGACGCT TCCTGCCGGA TCGCTTCGTT GAAGGAACAT GCCCGAACTG CGGGTATCCG CGCGCGCGCG GCGATCAGTG CGACGGTTGC GGGCATCTGC ACGATCCGCA AGACCTGATT GCGCCGCGTT CGGTGCTCGA TGGTGCACCG GTTACCTTCC GCGAGACCGA GCATTTCTTC CTCGACCTGG CGAAACTTGA ACCGCAGTTA CGCGCCTGGC TCGACAGCGT TGACCGGAGC TACTGGCGCC CGAATACGCT CCTGTTTACC CAGAACTGGC TCCGCGAGGG GTTGCGCGGG CGCGCCATCA CCCGCGACCT GGAGTGGGGC GTACCGGTGC CGGTTGATGA CCCGACGTTC AAGGACAAAC GCATTTACGT CTGGTTCGAT GCGGTCATCG GCTATTACTC GGCGTCAATC GAATGGGCGC AGCGCAGCGG CGCGCCGGAT GCATGGCAAG AGTGGTGGGT GTGCCGTCCC GATGGTTCGT CGCCAGCGCG GTCGTACTAT TTCATCGGCA AGGACAATAT TCCGTTCCAC ACGATCATCT GGCCCGCGAT TCTTATCGGC TATGGCGACC TAGCGCTCCC CTATGATGTG CCCGCCAACG AATTCCTCAA TCTCGAAGGC GACAAAATGA GCACCAGCCG GAACTGGGCG CTCTGGGCGC CAGAGATTGA GGAGCGGTAT CAATCTGATG CCATTCGTTA CTACCTGATC GCCAACGGAC CGGAAACGCG CGATAGCAAC TGGAGTTGGG CGGATTTCGT GCAGCGCGTC AATAGCGAAC TTGTGGCGAC GTGGGGGAAC CTGGCGAACC GTGTGATCAG CCTGACGCAC CGCAATTTTG GCGCGGTGCC GCAACCCGGC GCATTGATCG ACGCCGACCG TCAGTTGATC GCTGCGACGC AGCAGGCGTT CGAGCAGGTG ACGACGCTGC TCGAAGGGGT CAAATTGCGC GCAGCATTGC AGGAGGCGAT GGCGCTGGCG CAGACAGCCA ATCAGTATCT CAGCGATCAG GAACCGTGGA AACTCGTCAA GAGCGATCAG GAGCGCGCGG CAACCGTGTT GTTCGTGGCG CTGCGCACGG TCGATACGCT GAAAACGCTC TTCTGTCCGT TTTTGCCGTT CAGCAGTCAG CGCCTGCACG AGTTGCTCGG CTACAGTGGA ACCATCGCAC CACAGCCATA CGTCGAAGAA ACCGACGCGC CGGATGGCGC GCCGCGCCTG ATCCTGACCG GTGATTACAC CACAGAGGCA GGCTTGTGGA CTCCCAGTGT ACTTGCGCCA GGACAGCCGA TTCACGCGCC GGCGCCTCTG TTCCAGAAAC TGGATGAATC GATCGTGGCG GACGAACTTG CGCGTCTGCA CGCAAAAGTG CGTTCGTGA
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Protein sequence | MPDNILVAVA WPYANGPFHV GHIAGAYLPA DVFARYQRLR GNRVLMVSGS DCHGTPITIA AEREGITPQD VIRRYHPTFL KTFQTLGISF DLFTQTYTDN HYRVTTDIFL RLLENGYLYK ETMVGSYSET LGRFLPDRFV EGTCPNCGYP RARGDQCDGC GHLHDPQDLI APRSVLDGAP VTFRETEHFF LDLAKLEPQL RAWLDSVDRS YWRPNTLLFT QNWLREGLRG RAITRDLEWG VPVPVDDPTF KDKRIYVWFD AVIGYYSASI EWAQRSGAPD AWQEWWVCRP DGSSPARSYY FIGKDNIPFH TIIWPAILIG YGDLALPYDV PANEFLNLEG DKMSTSRNWA LWAPEIEERY QSDAIRYYLI ANGPETRDSN WSWADFVQRV NSELVATWGN LANRVISLTH RNFGAVPQPG ALIDADRQLI AATQQAFEQV TTLLEGVKLR AALQEAMALA QTANQYLSDQ EPWKLVKSDQ ERAATVLFVA LRTVDTLKTL FCPFLPFSSQ RLHELLGYSG TIAPQPYVEE TDAPDGAPRL ILTGDYTTEA GLWTPSVLAP GQPIHAPAPL FQKLDESIVA DELARLHAKV RS
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