| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2015 |
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| Symbol | |
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| ID | 5208977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2503975 |
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| End bp | 2504685 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595622 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001276351 |
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| Protein GI | 148656146 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.766228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00367889 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCAGC GCGCACGCGT TCCCCGGCAT ATTGCTATCA TCATGGATGG GAATGGTCGC
TGGGCGCGTC AGCGCCATTT GCCGCGCCTT GCCGGTCATC GCGCCGGCAC GGAGAATATT
CGCCGCATTG TGACTGAGTG TGCGGAGCAG GGGGTGCAGT ATCTGACCCT GTATGCCTTC
TCGACCGAAA ACTGGTCACG ACCATCGGCG GAGGTCGATG GCTTGATGCG CATTTTGAGC
GATTTCATCG ACCGCGAGAC GATCAATCTG CACCGCGAAG GGGCGCGCCT GCGCCACCTC
GGGCGCCTGG AGAATATTTC CGCTGAACTT CGTCAGAAGA TTCTTGATGC TATCGAATTG
ACGCGCCACA ATACCCGGAT TACGCTGGCG GTCGCCTTCA ACTATGGCGG GCGCGCCGAT
ATTGTCGATG CGGTGCGTGA ATTGATCGCG CTCGGCGTGA AACCGGAAGA TGTGACCGAA
GCAGTGATCA GCGATCATCT CTCGACCCGC GGGATGCCCG ACCCCGACCT GATCATTCGC
ACCAGTGGCG AATGGCGCCT CTCGAACTTC CTGATCTGGC AGGCAGCCTA CAGCGAATAC
TGGACTACGC CGGTCTACTG GCCCGATTTC AGCCCTGAAC ATCTCCGTCA GGCAATTTAT
GACTATGGAC AACGCGAACG CCGCTTCGGC GGACTCTCAG AGGAATCCTA G
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| Protein sequence | MSQRARVPRH IAIIMDGNGR WARQRHLPRL AGHRAGTENI RRIVTECAEQ GVQYLTLYAF
STENWSRPSA EVDGLMRILS DFIDRETINL HREGARLRHL GRLENISAEL RQKILDAIEL
TRHNTRITLA VAFNYGGRAD IVDAVRELIA LGVKPEDVTE AVISDHLSTR GMPDPDLIIR
TSGEWRLSNF LIWQAAYSEY WTTPVYWPDF SPEHLRQAIY DYGQRERRFG GLSEES
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