Gene RoseRS_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1995 
Symbol 
ID5208957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2474580 
End bp2474966 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content54% 
IMG OID640595602 
ProductPilT domain-containing protein 
Protein accessionYP_001276331 
Protein GI148656126 
COG category[S] Function unknown 
COG ID[COG3744] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.691704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0431251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTGC TCCTCGATAC CCATAGCTTC ATCTGGTTCG TGGAGGGCAA TCCCGCGCTC 
AGCTCGCACG CACGAACGCT CATCGAAGAA CCGACCAATG AAGTATTCCT GAGCATGGCT
AGCGTGTGGG AGATGGCGAT CAAAGTGAGC CTGGGCAAGC TGCGCTTGAG CCAGCCCTTC
GACTTGTTTA TTCCCTACCA ACTCTTGTTG AACGACATTA TCTTGCTCGA CATCGCGGTG
CGGCATGCGT TGCTGGTCGC CACACTGCCC TTTCATCATC GTGATCCATT TGATCGCCTG
CTGATCGCCC AAATTCTGGT CGAAGGCTGG CCCCTTATCA GTGCTGATAG CATCTTTGAC
ACATATGGGG TGAATCGGCT CTGGTAA
 
Protein sequence
MKLLLDTHSF IWFVEGNPAL SSHARTLIEE PTNEVFLSMA SVWEMAIKVS LGKLRLSQPF 
DLFIPYQLLL NDIILLDIAV RHALLVATLP FHHRDPFDRL LIAQILVEGW PLISADSIFD
TYGVNRLW