Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1995 |
Symbol | |
ID | 5208957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2474580 |
End bp | 2474966 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640595602 |
Product | PilT domain-containing protein |
Protein accession | YP_001276331 |
Protein GI | 148656126 |
COG category | [S] Function unknown |
COG ID | [COG3744] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.691704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0431251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACTGC TCCTCGATAC CCATAGCTTC ATCTGGTTCG TGGAGGGCAA TCCCGCGCTC AGCTCGCACG CACGAACGCT CATCGAAGAA CCGACCAATG AAGTATTCCT GAGCATGGCT AGCGTGTGGG AGATGGCGAT CAAAGTGAGC CTGGGCAAGC TGCGCTTGAG CCAGCCCTTC GACTTGTTTA TTCCCTACCA ACTCTTGTTG AACGACATTA TCTTGCTCGA CATCGCGGTG CGGCATGCGT TGCTGGTCGC CACACTGCCC TTTCATCATC GTGATCCATT TGATCGCCTG CTGATCGCCC AAATTCTGGT CGAAGGCTGG CCCCTTATCA GTGCTGATAG CATCTTTGAC ACATATGGGG TGAATCGGCT CTGGTAA
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Protein sequence | MKLLLDTHSF IWFVEGNPAL SSHARTLIEE PTNEVFLSMA SVWEMAIKVS LGKLRLSQPF DLFIPYQLLL NDIILLDIAV RHALLVATLP FHHRDPFDRL LIAQILVEGW PLISADSIFD TYGVNRLW
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