| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1958 |
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| Symbol | |
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| ID | 5208920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2437021 |
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| End bp | 2438124 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640595566 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001276295 |
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| Protein GI | 148656090 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.487296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCGG TTATCACTGC GCTTCCCGGA GACGGCATCG GACCGGAAGT GGTTGCTGAG
GGGAGGCGTG TTCTCGAAGC GGTTGGAGAG CGTTTCGGAC ATACCTTCGA CATGCGCGAA
GCGCTGATCG GCGGATGCGC CATCGACGCC GTTGGAACGG CGCTGCCAGA CGAAACCCTG
CGCCTGTGCC GCGAGTCGGA TGCGGTGCTT CTCGGCGCAG TCGGCGGTCC AAAATGGGAT
AACCCGGACG CGCCGGTGCG TCCCGAACAG GGACTGCTCG GCATCCGCAA GGCGCTGGGA
CTGTTCGCCA ACCTGCGCCC GGTCACATTG CACCCGCGCC TGATCGCCGC GTCGCCGCTG
CGCCCCGAAC GATTGCAGGG AGTTGATCTG ATCGTTGTAC GTGAACTGAC CGGCGGCATC
TATTTTGGCG AAAAAGGGCG CGATACGACC CCTGATGGCG GCGAGAGCGC CTATGACGAA
TGCGTCTACA CCACGGCTGA GATCGAGCGG ATCGTGCGGA CAGCCGCAAC CCTGGCGCGT
CAGCGGCGCA AAAAAGTGAC CTCGGTGGAC AAAGCGAACG TGCTGGAAAC CTCACGCCTG
TGGCGCAGCG TCACAACACG CGTGATGCGC GACGAGTTCC CCGACGTGCA TCTGGAACAC
ATGCTGGTCG ACGCATGCGC CATGCACCTC ATCCGCCGTC CCTCAGACTT CGACGTGATC
GTGACCGAAA ACATGTTCGG TGACATTCTG ACCGATGAAG CATCGATGCT GGCAGGATCG
ATGGGGATGC TTCCATCCGC ATCGCTCGGC GCACCCGGCG ACACCGGCAG GACGACGCGG
ATGGGGTTGT ACGAACCCAT CCACGGCTCA GCGCCCGACA TCGCCGGCAA AGGGATCGCC
AACCCGCTGG CAACCATCCT GAGTGTAGCG CTGCTTCTGC GACACTCGCT GGGGCTGGAG
CGCGAAGCGC GCGCCGTTGA AACCGCCGTC TGGCGCACCA TCGAGGATGG CATCGTCACC
GCCGACATTG CTGCGCCAGA TGAGCGCCCC GCAACCACGA CCGACGTCGG CGCGGCAGTG
GCAGCGCGGG TCATCGTCGG GTAA
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| Protein sequence | MHAVITALPG DGIGPEVVAE GRRVLEAVGE RFGHTFDMRE ALIGGCAIDA VGTALPDETL
RLCRESDAVL LGAVGGPKWD NPDAPVRPEQ GLLGIRKALG LFANLRPVTL HPRLIAASPL
RPERLQGVDL IVVRELTGGI YFGEKGRDTT PDGGESAYDE CVYTTAEIER IVRTAATLAR
QRRKKVTSVD KANVLETSRL WRSVTTRVMR DEFPDVHLEH MLVDACAMHL IRRPSDFDVI
VTENMFGDIL TDEASMLAGS MGMLPSASLG APGDTGRTTR MGLYEPIHGS APDIAGKGIA
NPLATILSVA LLLRHSLGLE REARAVETAV WRTIEDGIVT ADIAAPDERP ATTTDVGAAV
AARVIVG
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