| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1952 |
|---|
| Symbol | |
|---|
| ID | 5208914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2420275 |
|---|
| End bp | 2421351 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640595561 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_001276290 |
|---|
| Protein GI | 148656085 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGGAA ACACATTTGG ACAGGTTTTT CGATTGACAA CCTGGGGCGA ATCGCACGGA
CCCGCAGTTG GGTGCGTGGT CGATGGGTGC CCGGCAGGTA TCGAGATTTC GGAAGCGTTC
ATCCAGCGCG AACTGGATCG TCGCCGGGTC GGGCAGAGCC GGGTAACATC GGCGCGTCAG
GAACCCGATC AGGTGCAGAT CCTGTCGGGG GTGTTCGAGG GACGTTCGAC CGGCGCCCCC
ATCAGCATGC TGGTCTTCAA TACCGATGCG AAGCCGGGGC ACTACGATAC CATCAAGCAC
CTCTACCGCC CCGGTCACGC CGATTACACG TGGGACGCGA AGTATGGCTT TCGCGACTGG
CGCGGCGGTG GACGGAGCAG CGCACGCGAG ACGATCGGGC GTGTCGCTGG CGGCGCGATT
GCGAAACTGC TCCTTGCGCG CTACGGCATT TCGGTCATTG CGTGGACATC GCAACTCGGC
GATCTGAAAG CCGAGGTTAT TGATGAGAGC GAAATCGAGC GCAACATCAT GCGCTGCCCG
GATGCGCGGG TTGCCGCCCT GATGGTCGAG CGTGTCGAAC AGGCGCGGCG CAGCCTCGAC
TCGCTCGGCG GCGTGGTCGA AGTGCGCGCC CGTGGCGTTC CTCCCGGTCT CGGCGAGCCG
GTCTTCGACA AATTGCAGGC GGATATTGGC AAGGCAATGT TCAGCATCCC GGCGATCAAA
GGGGTTGAGT TCGGCGAGGG GTTCGGTGTC GCATATATGA CCGGCTCGAC CCACAATGAC
CCGTTCGTGC GCCGCGATGA TGGCACAATC GGAACCGCGT CCAACCATCA CGGCGGTATT
CTCGGCGGCA TCAGCACCGG CGAAGAGATC GTGCTGCGCA TCGCTGCCAA ACCGCCAGCG
TCCATCGCCC GTCCGCAACA CACGGTCGAT CGCGCCGGAA ATCCCGCTGC GATCGAAATC
CACGGTCGCC ACGACCCGAC CGTGCTCCCA CGGCTGGTTC CAATCGCCGA GGCGATGCTG
GCGCTGGTGC TCGCCGATCA CCTGCTGCGG CAACGCCTGG CACGGGTGGA CGCTTGA
|
|---|
| Protein sequence | MPGNTFGQVF RLTTWGESHG PAVGCVVDGC PAGIEISEAF IQRELDRRRV GQSRVTSARQ
EPDQVQILSG VFEGRSTGAP ISMLVFNTDA KPGHYDTIKH LYRPGHADYT WDAKYGFRDW
RGGGRSSARE TIGRVAGGAI AKLLLARYGI SVIAWTSQLG DLKAEVIDES EIERNIMRCP
DARVAALMVE RVEQARRSLD SLGGVVEVRA RGVPPGLGEP VFDKLQADIG KAMFSIPAIK
GVEFGEGFGV AYMTGSTHND PFVRRDDGTI GTASNHHGGI LGGISTGEEI VLRIAAKPPA
SIARPQHTVD RAGNPAAIEI HGRHDPTVLP RLVPIAEAML ALVLADHLLR QRLARVDA
|
|---|
| |