Gene RoseRS_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1860 
Symbol 
ID5208820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2298651 
End bp2301116 
Gene Length2466 bp 
Protein Length821 aa 
Translation table11 
GC content58% 
IMG OID640595468 
Producthypothetical protein 
Protein accessionYP_001276199 
Protein GI148655994 
COG category[L] Replication, recombination and repair 
COG ID[COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.441776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC GCCTCGAATT CGACATTGCA TTCAAGAGCG ACTACCACGT CAGTGCCGGG 
CATGGTCTCG GATTGCAGGT GGACTCGGCA CTATTGCGTG ACCCCGACAA CGTGCCGGTG
ATCCGTGGCA CGGTGCTGGC TGGTCTCCTG CGTGAAAGTC TGGCGAACCT GTTATCACTC
GATCCCTTCG CTGGCGAACA GCGCTGTCAG GCTTCCGGCG GCGACGCATC AAAGCCCGTG
TACTGTGGCC AGTTTGCAAC AAACCATGGT TCCGAATGCC CGGTCTGCAC TATCTTTGGG
TCTACCGGGC GACGAAAACG CTGGCGCATT GCATCGGCTC GACCAGCGGG ACTGACAACA
CCTCAGACAT CATCTCGTGA GTGGCGGGCA GGCGAAACAG CTGCACAGAT CACAACACGC
GTGCGCGTTA ATCCTCGCAC ACGCCGTGCC GAAGAGAACA AACTCTTCAC CCGTGAAGAA
GGGGACGGTA GCCTCCATTT TCGCTTCATC GCCGAATGTA TGGATGAGAG TGAGGATGCC
TGGCGTGAGG CCGAGTGGCT GGTGGCGGCG GCACGGCTGC TGCGCAACCT GGGCGCAGGC
AAACGTCGGG GCTATGGTGA ATGTGAGATT CACCTGGCGG ACCTCTCACA AGAGAACAGA
CTGCTTCAGC GGCTGGAACA GCGATTGAAG AATGAGCCAG TCGCGTCTGC AGGCGCCGCT
CAGAGAGCAA ACATTCAGCC ACTGACGCTT CCGGCAGATC CAGGCCAGCA CACCTATCGC
CTTCAGGTGC TTGTACGCCT CGACGAACCG CTGCTCGTCG CCCGTCGCGC CGAGGCGGGC
AACCAGTTCG AGACGCTTGA AACCATCCCT GGCGCTGTTC TGCGCGGTGC GCTGGCCTGG
CGCATTGCCC AGCATCTGGG CGCCCAACTC GAAGATCACA GCAGCACAGC GTATCGGAAC
TTTGTCAACC TGTTCTTTCA CGATACTGTG CGCTTTTCGA TGCTCTTGTC TGTAGAAATA
CAGCGAGAGA AGTCTGGCTA TCCAACCATT GTTGCCCCAC GCGACCTTTT CACCTGCGAA
TTGTATCGCG GTTATGGGAC GCAGAGCCAA GATCAAGGGC GGGCACAGAG CAAAGAAGGG
CATGGCGTAT GGAGTCTCCT CCAGGACAAC GCGCCGCAGG AATGTCCAAT CTGTGCCCAG
CCTGATGCCG TCAGCGGAAG ACAGGCCGCG TCGGTGAAGC TGGAGACGTT GAGTGGGTTT
ATCTCGTTAG TGAAGGACGC ACCACGGTCG AAGCACAAGC CGAAGCAGAC TGTAGAAATG
CACATCCGCA TCGATCCGAA GAGCGGCCGC GTGCGCACTG GCGACCTGTT CGGTTATGTG
GCGCTGGAAC CAGGTCAATA TTTCCTGGGT GAGATCACGT GCAGCAATGA GCAAACCTGG
AAGACGTTAC AGACAATGGC CAATCTTCGT CCAAACGGCG ATGTAAACGA GCTGACGCTC
GGTAAGGCGG GTCAACGTGG CTACGGTGAG GTCAGTGCTG TCTTTCGACC ACAGTCAACG
CCGCACCTGC ATTTCAGCAG TGTGCAGAAG CGGGTTTCAA CAACAGAACG AATCACGCTG
CTGCTGCTGA GCGATGCCAT TGTGCCGGAT CCGTGGGGCC GTTTCTGGCG TGGGTTCGAT
GCCGACTGGC TGAAGCAGGA ACTGAAGTTG CCGAAAGGCG CCAATGTAGC CATTGATCGC
AACCAGCATG GCGAGCTTTT GGCTTTCTCG ACAACGCGGG CGGTGGATGC CTTCAATGCA
AAGCTGGGGT TGCCACGAGC GCGCGACATC GCCATTGTGG CCGGCTCCAG TGTGCGCCTG
ACCTTCACCG GCATTGCGTT GCGAGACCTG TTGTCGCTGC TGGAGGCCGC AGAAGCGCAG
GGTATTGGTC TGCGTCGTGA TGAAGGGTTC GGTCGCGTGG CATTCAACCA TCCGATCTAT
CAACAGCTTG ACCGACAACT GCTTGATGTG CAAACCACCG CTGCCGAACT GGCGCCGCTT
GCCTTGAGTA ACGCGCATAC CGCACACTTC TCTGCCCGCG TGTTGCAATT CTGGTTAGAA
TGGGCCAGGA AACTTGACGA AGAGTTCCAG ACAGAACTGA TAAGAGACGG ACGCTTCGAG
GCAGTTGCTC GCCTGCTCTT CACATCGCAG CAGACCTCGC TGGAAGCCAT CAAGAGCGAT
CTGCAACGGA TGGGACGGCA AGATACATTG CTTAGCGCGC CATTGTCGGG CCGCGATAAG
CCAAACTTCT TCGAAACCGA TGGAAAGCAG GGCCTGGAGA TGATTCAGCG CATGCTCGAT
GCCCTGGCAA CGTTGCTCAA GGAGAACGAG CTAGAGCAGG AAGCACAAGC GTGGTGTGTC
GGGCTGCGAT TGCTGGCTGA TCGCATCGCC GGTCCCGCCC GTCAGAAAGC CATGGAACGG
AGGTAG
 
Protein sequence
MSIRLEFDIA FKSDYHVSAG HGLGLQVDSA LLRDPDNVPV IRGTVLAGLL RESLANLLSL 
DPFAGEQRCQ ASGGDASKPV YCGQFATNHG SECPVCTIFG STGRRKRWRI ASARPAGLTT
PQTSSREWRA GETAAQITTR VRVNPRTRRA EENKLFTREE GDGSLHFRFI AECMDESEDA
WREAEWLVAA ARLLRNLGAG KRRGYGECEI HLADLSQENR LLQRLEQRLK NEPVASAGAA
QRANIQPLTL PADPGQHTYR LQVLVRLDEP LLVARRAEAG NQFETLETIP GAVLRGALAW
RIAQHLGAQL EDHSSTAYRN FVNLFFHDTV RFSMLLSVEI QREKSGYPTI VAPRDLFTCE
LYRGYGTQSQ DQGRAQSKEG HGVWSLLQDN APQECPICAQ PDAVSGRQAA SVKLETLSGF
ISLVKDAPRS KHKPKQTVEM HIRIDPKSGR VRTGDLFGYV ALEPGQYFLG EITCSNEQTW
KTLQTMANLR PNGDVNELTL GKAGQRGYGE VSAVFRPQST PHLHFSSVQK RVSTTERITL
LLLSDAIVPD PWGRFWRGFD ADWLKQELKL PKGANVAIDR NQHGELLAFS TTRAVDAFNA
KLGLPRARDI AIVAGSSVRL TFTGIALRDL LSLLEAAEAQ GIGLRRDEGF GRVAFNHPIY
QQLDRQLLDV QTTAAELAPL ALSNAHTAHF SARVLQFWLE WARKLDEEFQ TELIRDGRFE
AVARLLFTSQ QTSLEAIKSD LQRMGRQDTL LSAPLSGRDK PNFFETDGKQ GLEMIQRMLD
ALATLLKENE LEQEAQAWCV GLRLLADRIA GPARQKAMER R