| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1816 |
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| Symbol | |
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| ID | 5208775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2242032 |
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| End bp | 2242964 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640595424 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001276156 |
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| Protein GI | 148655951 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0119683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTGG CGTTCACCAC GCTGGTCGGT GTTCTCCTCG CAGCCTGTAG CGCTCCGGCG
CAAACGACGC AACCAACCGC TGCACCGCAG CCCGCCCCCG CAGAAGCCGC ACCGGTCCGC
ATTGGATCGA AAAACTTCAC CGAAGCTATT CTGGTCGCCG AGATGTACGC GCTGGCGCTG
GAAGACGCTG GCATCCGCGT CGAACGCAAG TTTAACCTCG GTGCAACACC GGTGGCGCAC
ACGGCGCTGG TCAACGGCGA GATCGATCTG TACCCGGAGT ATACGTCGAC CGGTTTGCTC
GAAGTGTTGA AGCAGGCGCC GATCGCCGAT GCGAAGGGCA TTCTGGAAGC AGTGCGCAAG
GGGTATGAGG AACAGTTCAA ACTGACCTGG CTCGAACCAT CGCCGTTCAA CAATACGAAT
GCCCTGGCGA TGACCCGCCA GCGCGCCGAA GAACTGGGCA TCCGCACCTA CTCCGACCTG
GTGGCGCGGT CGGGTGAACT GAAACTCGGC GGACCGCCGG AGTTCCCGGA GCGTGAAGAT
ACCAAAGGGT TGATGGCAGC GTATGGGTTC GATCCCAAGT TCATCGGCGA TAACTTTGTA
CAACTCGATA CCGGCGCGCT GCGCTACGAG GCGCTCACGA AAGGCGATAT CGATGTGGTC
GTCGCCTTCG GCACCGATGG ACAGATCAAT GGACTGGGAC TGGCGTTGCT GGAGGACGAT
AAGAACTATT ACCCGATCTA CCAGATTGCG CCGGTCATCC GGCAGGATAC GCTCGCCGCA
AATCCCGCCA TCGCTGAGAC GCTCAACAAA CTGGCGCCAC TCCTGACCAA CGACGTCATG
TCGGGGTTGA ACTGGCAGGT CGATGGTCCG GAGAAGAAGG AGATCGCCGA CGTGGCGCGC
ACCTTCCTGC AACAGCAAGG GTTTATCAAG TAG
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| Protein sequence | MLLAFTTLVG VLLAACSAPA QTTQPTAAPQ PAPAEAAPVR IGSKNFTEAI LVAEMYALAL
EDAGIRVERK FNLGATPVAH TALVNGEIDL YPEYTSTGLL EVLKQAPIAD AKGILEAVRK
GYEEQFKLTW LEPSPFNNTN ALAMTRQRAE ELGIRTYSDL VARSGELKLG GPPEFPERED
TKGLMAAYGF DPKFIGDNFV QLDTGALRYE ALTKGDIDVV VAFGTDGQIN GLGLALLEDD
KNYYPIYQIA PVIRQDTLAA NPAIAETLNK LAPLLTNDVM SGLNWQVDGP EKKEIADVAR
TFLQQQGFIK
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