Gene RoseRS_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1805 
Symbol 
ID5208764 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2229648 
End bp2230812 
Gene Length1165 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID640595413 
Producthypothetical protein 
Protein accessionYP_001276145 
Protein GI148655940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.074128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCAC GCCGGACCCT TCACGTGTCC GTCGAGGAGC GGGAGACCCT CGAAGACCTG 
CGCGATCACG CCCCCAAGCC CTATGTGCGT GAACGGGCGG CAGCGTTCCT GCTCATCGCG
TCCGGCGTGC CGCCCGCTGT CACGGCGCGC GAACGCTTGC TGCGTCCGCG CCATCCGGAA
ACCGTCTCTC TCTGGCTGAA TCGCTGGGAA GCCGAGGGCA TCGATAGCCT CCCCATCCGG
GACGGACGCG GGCGCACGCC CGCTTGTTCC CCCTGACCGC CATGACCCTG AGACGGCGGC
TCCTGAGGTG GAGCATCTGG TCCGCCGTGA CCCGCGGCCG TGCGGGCTGA CCCAGACGCG
CGGGACCCTG GACGCCATCC GCAGCCCGTT GGGGTGGGGA CGCGACGCCG CGCTGCGCGG
GATCGCCCGC ATCCTGGATC GGTTGGGCAT CACCTGGCAG CGCGCCCGCA GTCATGGGCC
TAGCCCTGAT CCTCACGATC AGGCCAAACT GCAGGAGATT GCGGACGTGG TGGAGGATGC
CCGCGCGCAC CCCAACCAGG TGGTGACCGT GGATCGGGAT GACGTCACGG TCACCCGGCG
CCCGACCCTG GCCAACGGGT ATGGACAGGC AGGCGCCGAT CAGGTGCGGG CGGAACGGAG
TCTGGCGACC GATGGTGACC TGCGCATCGT GGGCAGTTTG GACGTCGTGA CGGGCCAAGT
GGTCACCCGG CGGGCGAAGA CGATGGGCCT GGCGACGCTG GCGCCGTTCT TCCCGGACCG
GCGCGCTGCC TATCCTGAGG CTGAGCGCAT CGATGTCATT CTGGATAATT GGCCGGTCCA
TGGTCATCCG GATGTCCTGG TGGCGCTTGA GCCGCAAACG ACCCGCTGGG CGTTTTCCCG
TCCTGGCAAT GGGCCGGCCA CCCCCAGTGG ACGGGCCGTG CGCCGGGCTG GAGATGTCCG
CCGGCCCATC CAACTGATGC CGTTGCCGAC GTATGCGTCG TGGTGCAACC CGATCGAGAA
GCTGTGGCGG TGGATGCGTC AGGAGGTCAC CCGCGTGCAT CGCTGGGCGA CGGATCTCGA
TCAGTTGCGC AGCCATCTGG ATGCCTTCTT CGCGTCATTT GCAACCGGCT CGCCAAAGCT
TGTACCGTAT GTCGGTCTCG GATAG
 
Protein sequence
MPARRTLHVS VEERETLEDL RDHAPKPYVR ERAAAFLLIA SGVPPAVTAR ERLLRPRHPE 
TVSLWLNRWE AEGIDSLPIR DGRGRTPACP PDRHDPETAA PEVEHLVRRD PRPCGLTQTR
GTLDAIRSPL GWGRDAALRG IARILDRLGI TWQRARSHGP SPDPHDQAKL QEIADVVEDA
RAHPNQVVTV DRDDVTVTRR PTLANGYGQA GADQVRAERS LATDGDLRIV GSLDVVTGQV
VTRRAKTMGL ATLAPFFPDR RAAYPEAERI DVILDNWPVH GHPDVLVALE PQTTRWAFSR
PGNGPATPSG RAVRRAGDVR RPIQLMPLPT YASWCNPIEK LWRWMRQEVT RVHRWATDLD
QLRSHLDAFF ASFATGSPKL VPYVGLG