| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1790 |
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| Symbol | |
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| ID | 5208749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2210424 |
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| End bp | 2212454 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595398 |
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| Product | Amylo-alpha-1,6-glucosidase |
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| Protein accession | YP_001276130 |
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| Protein GI | 148655925 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0378432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACTTC AGCGCTATTT CATCGATGAT AATGTCTGGG AGTCGGAAGC AACGCCGACC
ACGCCGGTCT TTATCAGCGG GCAACGTATC TACGCCATCA CAACGATTGG CGGGGAGCGA
CATCCGTTTG GCGAATGGCA TCTGCGCGAC ACCATGGGGG GTGTCTGGGC GCATCCGCTG
CGGATCATGG ACGGATGGGC GCTGGCACTG GAAATGGAAG GCATCGTAAC CCCGCTCGAT
CACGCCGTCC GCTGTGATCT GTTCGGTGCA TACGTTACCC GCCACTTTAC GGTCGGAACT
CTGACGCTCG AATGGACGGA ATTCGCGGCT GATGATCAGC CCCACTACTA CGCAACCCTG
CTGGCGCGCA ACGACGGCGC CGCACCGGTA AATGCAACCG TGCTGCTGCG CGCCGAAGCC
GACCTGCGCT TCTGCTGGTT CGGCGGCGTC GCGCCTGCCG AACCGGAGAT AGATACCATC
CCCGGAGGCG TTGCCTGGCG CGCAACAGGC GCGTATGCTG GCGTCACCGT GACACTGGTC
AGCGCATCGC CATCTGTGTG GGAAATCAGC GGAAGGATGG CGCAGGCGCG CTTCCCGCTG
ATAGTGCAGC CCGGCGAGGC GCTGGCGCTG CAATGGCGGC TTGCCGTGCA GCGCAACGAT
GATCCGTTGC CGGGGAATGT GCTGCGCGCC GCGGTGGATA CTCTTTCGTC AAAGATTGCT
CTCTATCGCA CGATTACCAG TGCGATACGC CTGGAAACCC CCGACCGGGA CATCAACCGC
TACTGGCAGG TGGCGCGGCA GAATATCCAC ATGCTCAGAG CCGACTATCG CCCGGCGCTT
GCGCCATACC TGCTCGCGGG ACTGCCGGAG TATCCGCAAC TCTTCGGTTG TGATACAACG
TACAGCGTCC CTGGCGTCGT CGCCAGCGGG TTTGCCAGTA CCGCGCGCAG TGCACTCGAG
GAACTCGGAC GGTATGCCTG GCGCGCATGC AGCCGCGTTC CCCATGAAAT CACTACGAAT
GGGCGTGTCT ACCATCCGGG CAACATTCAG GAAACGCCGC AGTTTGCCGT CGCCTGTTGG
GATTATGTGC GCTGGAGCGG CGACCTGGAC TTTCTAGAGC GGATGTATCC GCTATGCGTC
GAGGGTTTGG AGCATTTCAG CGCAACACTC GAAGGACGCG GCTACCCGAT TGGCGACGGC
GTTGTTGAAG TTCCCGGTAT GGGCGCATGC AAACTCGATG TGGTGTGCTA CCTCTACCAG
GCATTGACGA CGTTGCGCGA TATGGCGCTG ACGCTTGGAC GACCGGGTGA TGCTGTCCGG
TTCGCCGGAT ATGCCGGTGA ACTCACGGCA CGCTTTGAGT CCGACTGGTG GATTGAGCAG
GAGGGAATGT ACGCCGACTC GTTGCACCTC GACGGTCGGC AACAGTTCGA CGGGCACTGG
ACTGTCCTGC TCCCCGTGTT GACCGGTATT GCTGCACCGG AACGGGCTCA GCGGGTGCTG
GATCGGATCG TGCGTGAGTG GGTCAACGAA TGGGGCATGG TCCATACCCG CGGCGCTGAC
ATGCGTGTGT GGACACTGCC GACCGGACTG CTGGCACTGG CAGCCTTCCG CCACGGCGAC
GCGGATACCG GCATCCAGTT GCTGCGCAAT ATCGGCGTCA CGGCGCGTTA CGGGACGCTC
GGAACGCTGA AGGAACTGAT ACCGCAGGGG TTGTGCTTCA TTCAACTCTG GTCCGCCGCA
CTGTTCGTGC AGGGTATTAC CGAAGGGTTG TTCGGACTCA GTCCGCATGC TCACCGCCAC
GAACTGATCA TCGAACCTCG CCTGCCGTCG GGATGGAGTG AAGCGACGCT GCACGGTCTG
CGGGTGGGCG ATCAGACCCT CGACCTGCAC GTGACGCCAG AGTATGCTGA AATCCGCCTT
CTGAAAGGTG ATACGCCACT GCTCGCGCGC TACCGCGCCG CCGCCGATCA ACCATGGCGC
GAAGCTCGCA TCACACCGGG TGGTCGGGCG TTGTTGAAGC GGGAGGAGTG A
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| Protein sequence | MTLQRYFIDD NVWESEATPT TPVFISGQRI YAITTIGGER HPFGEWHLRD TMGGVWAHPL
RIMDGWALAL EMEGIVTPLD HAVRCDLFGA YVTRHFTVGT LTLEWTEFAA DDQPHYYATL
LARNDGAAPV NATVLLRAEA DLRFCWFGGV APAEPEIDTI PGGVAWRATG AYAGVTVTLV
SASPSVWEIS GRMAQARFPL IVQPGEALAL QWRLAVQRND DPLPGNVLRA AVDTLSSKIA
LYRTITSAIR LETPDRDINR YWQVARQNIH MLRADYRPAL APYLLAGLPE YPQLFGCDTT
YSVPGVVASG FASTARSALE ELGRYAWRAC SRVPHEITTN GRVYHPGNIQ ETPQFAVACW
DYVRWSGDLD FLERMYPLCV EGLEHFSATL EGRGYPIGDG VVEVPGMGAC KLDVVCYLYQ
ALTTLRDMAL TLGRPGDAVR FAGYAGELTA RFESDWWIEQ EGMYADSLHL DGRQQFDGHW
TVLLPVLTGI AAPERAQRVL DRIVREWVNE WGMVHTRGAD MRVWTLPTGL LALAAFRHGD
ADTGIQLLRN IGVTARYGTL GTLKELIPQG LCFIQLWSAA LFVQGITEGL FGLSPHAHRH
ELIIEPRLPS GWSEATLHGL RVGDQTLDLH VTPEYAEIRL LKGDTPLLAR YRAAADQPWR
EARITPGGRA LLKREE
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