| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1789 |
|---|
| Symbol | |
|---|
| ID | 5208748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2209059 |
|---|
| End bp | 2210237 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640595397 |
|---|
| Product | peptidase M24 |
|---|
| Protein accession | YP_001276129 |
|---|
| Protein GI | 148655924 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0357979 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTACC ACCAGAAGGC TGCTCAGGCG CAGGCATTGC TCGCTGAAAC CGGTATCGAT
GCCTGGTTGA TTTTTGTCCG CGAAAGCGCC ATTCGACCCG ATCCCGGCAT CGAACTTGCG
ATTGGCGTCG ATGTCACATG GGATTCGGCG TTTGTGTTTG GTCGCAACGG GCAGCGGGTT
GCGATTGTCG GGCGCTATGA TGTCGCCGGT GTACGCGCGT CCGGTCTGTT CGATACGATT
GTCGGCTACG ACGAAAGCAT CAGGGAATAC CTGATCGAAG CTCTGCGACG CCTCGATCCG
CTCACGATCG GTCTGAATTA CAGCCTCGAT GATCCAACTG CTGATGGACT GACATACGGA
ATGTTTCTCC ATCTCTGCGA TCTGCTGGCG GATACGCCCT TTCCTTCGCG TTTCGTGAGC
GCGGCGCCGC TGCTGGCAAA ACTGCGCTCG CGCAAGGTGC CAGCCGAAAT TGAGCGCATT
CGCGCAGCAG TTGCCGTCAC CGAAGAGATT GTCGATCTGG TTGAGCAACA GATCCGGCCC
GGCGTCAGCG AGGCGCAGAT CGCGGCTTTC ATCCACGATG AGTTTCGGCG TCGCCATCTG
GGGAGCGCAT GGGCATGGGA TGCCTGCCCG ATCGTGAACA GCGGTCCCGA ATCGGAAGCC
GGTCATGGCG GTCCGCGTGA TGATATTCTG GTGCAGCCGG GTCATCTGGT GCATATCGAT
CTTGGCGTGC AGCTCGATGG CTACTGTTCG GATATTCAGC GCATGTGGTA TGTCCGTCGC
GCTGGCGAAG ATGCGCCGCC GCAAGAAGTG CAGCGCGCGT TTGAGACGGT CATTCGAGCG
ATCGAGGCGG GCGCAGCGGC GCTACGCCCC GGCGTGTACG GCTACGAAGT TGATGCCGCT
GCACGTCGGG TTATTGTCGA TGCCGGGTAT GACGAGTACA AACACGCGCT GGGACATGGT
CTGGGACGTG CATGTCACGA CGGCGGTCCG TTGCTCGGTC CGCGCTGGCC CCGCTATGGT
CGCACCCCGG AGATGCAGGT CGAGGCGGGC AATGTGTACA CCCTCGAACT CGGCGTTACC
ACTTCCGCCG GGTACATTGG CATTGAAGAA GATGTGCTGG TGACCGATCA CGGCGTTGAG
TTTCTCTCGC GCTTCCAGCG CACGCTGCGG GAGGTGTAG
|
|---|
| Protein sequence | MLYHQKAAQA QALLAETGID AWLIFVRESA IRPDPGIELA IGVDVTWDSA FVFGRNGQRV
AIVGRYDVAG VRASGLFDTI VGYDESIREY LIEALRRLDP LTIGLNYSLD DPTADGLTYG
MFLHLCDLLA DTPFPSRFVS AAPLLAKLRS RKVPAEIERI RAAVAVTEEI VDLVEQQIRP
GVSEAQIAAF IHDEFRRRHL GSAWAWDACP IVNSGPESEA GHGGPRDDIL VQPGHLVHID
LGVQLDGYCS DIQRMWYVRR AGEDAPPQEV QRAFETVIRA IEAGAAALRP GVYGYEVDAA
ARRVIVDAGY DEYKHALGHG LGRACHDGGP LLGPRWPRYG RTPEMQVEAG NVYTLELGVT
TSAGYIGIEE DVLVTDHGVE FLSRFQRTLR EV
|
|---|
| |