| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1750 |
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| Symbol | hemC |
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| ID | 5208707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2162785 |
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| End bp | 2163696 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640595356 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001276090 |
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| Protein GI | 148655885 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.444396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGA CTCTGATTAT CGGCACGCGC GCCAGTAAAC TTGCACTGGT GCAGACGTAT
ATGGTCCGCG ACGCCTTGCA GTCGGCGCAT CCCGGATTGA CGGTCGCTGT CGAGCATATT
ACAACACGCG GCGACATCAT TCTTGATCGT CCACTCAATG CGATTGGCGA CAAGGGGTTG
TTCGTCGTCG AGATCGAGGA AGCGATGCGT GCCGGCAGAA TCGATCTGGC AGTTCACAGC
GCCAAAGATC TGCCATCGGT GTTGCCGCCC GATATGACGC TTGCGGCATG CCCGCGACGC
GCCGATCCGC GCGATGCGCT GGTGGCGCAA CCGGGTATGA CGCTGGCTGC CCTCCCTTCC
GGCGCGCGTG TCGGAACCAG CAGCCTGCGG CGCGCCTGTC AGTTGCGCGC CCTGCGACCC
GATCTCACGC TGGTCGATCT GCGCGGGAAT GTTGATACAC GGTTGCGAAA GTTGCGTGAA
GGGCAGTACG ATGCGATTGT GCTTGCCGCA GCCGGCTTGA AGCGCCTTGG TCTCGACGGT
GCGATCTCCG AGTTGATCGA ACCGGACGTG CTGATTCCGG CGGTGGGGCA GGGGGTGATC
GGCGTCGAGG CGCGCGCCGA CGATGAGGAG GTGCTCCGCC TCCTTGCACC GCTGGACGAT
CAGGCGGCGC GCATCGCCAT TACCGCCGAA CGCGCATTTC TGGCGCGCAT TGGCGGCGGC
TGTCAGGTGC CGGTCGGAGC GCTGGCGCAT CTCGAAGGCG ATGAATTGCT GCTGCGCGGG
ATGATCGGCG CGCGCGACGG GCGGATGGTG CGCGGGATGC AGCGTGGCTC AGCGTCCGAT
CCGGTTGGTC TGGGTTGTGC GCTGGCGGAC GAGTTGCTCG ACCAGGGCGG GCGGGCATTG
CTTGCAGGAT AA
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| Protein sequence | MKQTLIIGTR ASKLALVQTY MVRDALQSAH PGLTVAVEHI TTRGDIILDR PLNAIGDKGL
FVVEIEEAMR AGRIDLAVHS AKDLPSVLPP DMTLAACPRR ADPRDALVAQ PGMTLAALPS
GARVGTSSLR RACQLRALRP DLTLVDLRGN VDTRLRKLRE GQYDAIVLAA AGLKRLGLDG
AISELIEPDV LIPAVGQGVI GVEARADDEE VLRLLAPLDD QAARIAITAE RAFLARIGGG
CQVPVGALAH LEGDELLLRG MIGARDGRMV RGMQRGSASD PVGLGCALAD ELLDQGGRAL
LAG
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