Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1683 |
Symbol | |
ID | 5208640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2074610 |
End bp | 2075053 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640595290 |
Product | hypothetical protein |
Protein accession | YP_001276024 |
Protein GI | 148655819 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.523033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGATCT ATCTGGACAC ATGCACCCTG CACCGGCCGC TTGATGATCG CACGCAGCTG CGTATCGCGC TCGAAGCGGA CGCGGTGCTC ACGCTCTTGA CGCTGTGCGC GCAAGGAACG CTCACGCTGG TCGTCTCTGC GGTGAACGCC TTTGAAACAG CGCGTAATCC CCGCCCGCAG CGGGCGCTGT TCGTCCAGGC GATCATGGCG CGGGCTGCCG AGTATATCCC GCTGACGGAT GAGATTGAGG CGCGGGCGCA GGAGTTGGAG CGCGCAGGCG TCAAAGCGAT TGATGCATTG CATTGGGCGA CGGCGGAGGC GGCGGGGGTG GACCGCTTTT GCACCTGCGA TGATCGCTTC TATCGCAAAA TGAAAGCAGT GCCGGGCGTG ACGTTGAAAG CGGTCACGCC GCTCGAACTG ATCCAGGAGG TCGTGCCATG CTGA
|
Protein sequence | MRIYLDTCTL HRPLDDRTQL RIALEADAVL TLLTLCAQGT LTLVVSAVNA FETARNPRPQ RALFVQAIMA RAAEYIPLTD EIEARAQELE RAGVKAIDAL HWATAEAAGV DRFCTCDDRF YRKMKAVPGV TLKAVTPLEL IQEVVPC
|
| |