| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1544 |
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| Symbol | |
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| ID | 5208499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1885120 |
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| End bp | 1886406 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595150 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001275886 |
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| Protein GI | 148655681 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATC ACACGTTCCG CCGACAGATG CTCTGGGCTA TGCTGGGTGC GTGGATTGTT
GCGCTCGCGG TGGGTGCATG CGGTCAGGCG CCAGCTGCAC CGGCGCCGAC GACCGCACCG
GCTGCGCCGA CGACCGCACC GGCTGCGCCG ACGACCGCAC CGGCTGCGCC ACAGGGAGCG
CCGATCAAGA TCGGTTGCTC CCTGCCATTG ACCGGCGCCT TCGCCGACAC CGGCGTCTGG
GTGCAGCGCG GGTACGAACA ATGGGCGGAG GATGTCAACG CTGCGGGCGG GTTGCTCGGT
CGTCCGGTCG AACTGACAAT CTACGACGAC GAGAGCAAAA CCGAGAACGC GGTCAATCTC
CTCAACCGCG TTATCTCGGT CGATCAGGCG GATCTGTTGT GCGGCGGGTA TCCTGGCACC
GCCGCCGCCG CGCAGATGGC AGTCGCCGAA AAGAACCAGA AGGTCTATGT ATCGATGGGC
GGGCACATGG CGTCCTTCTC GCAGGGGTTC ACCTATGTCT TTGGCGCGCC GCCGCTGATG
GGGCAGTGGT GGTACGAAGG ATTGTACGGA TGGCTTGCCT CGCTCCCCGA AGCGGAACGA
CCAAAGAAGG CAGCGGTCTT CACCATCAAC AATCCGGTCG GCGCTGCCAT TCTGGAACCA
ATGCCGGAAA AACTGAGCGC CCTCGGCATT GAGATTGTTG TGAATGAGCG GTATGATGTG
CCGTTGACCG ATGCGGCGCC GCTGGTGACG AAAGCAAAAG GGGCGGAAGC GGACATCTTC
TTCGCCAACG GCTTCTTCCC CGACAGCGTA CAGATTGTGA AGGCAATGCG CGCCCTCGAC
TACAACCCCA AACTGATCGC TCAGGGGGTC GGATCGATCA TTCCTGCCTG GGTGCAGGAG
TTGGGCGCGG ATGGATACTA CGTCTTCTCC GGCACCGCTG TCCACCCGTC GTTGCCGTTC
GAGGGCATTT CCCGGCTGAA TGAGGTTGCC AGGGCGAAAT ACAATGCGCC GGTTGCGCCG
ATCTACTTTA TCTTCGGCTA TGCCTGGATG CAGGCATTGC AACGCGGCGT CGAAGGCGCG
CAGACCCTCG ATCAGACCGC CATCCGCGAC TGGTTGAAGG CAAACCAGAT CACCACGGTC
GCCGGAACAT TCACCTTCGA CGAGCGCGGT CTGCCGCCGC CGTACAACTA TCTGACCCAG
GTGATCGACG GCAAAGTGGA ACTGATCTGG CCGCCCGACG TGCGCACAAA AGAACCGATC
TATCCCAAAC CGGCGTGGGG GCAGTAG
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| Protein sequence | MTHHTFRRQM LWAMLGAWIV ALAVGACGQA PAAPAPTTAP AAPTTAPAAP TTAPAAPQGA
PIKIGCSLPL TGAFADTGVW VQRGYEQWAE DVNAAGGLLG RPVELTIYDD ESKTENAVNL
LNRVISVDQA DLLCGGYPGT AAAAQMAVAE KNQKVYVSMG GHMASFSQGF TYVFGAPPLM
GQWWYEGLYG WLASLPEAER PKKAAVFTIN NPVGAAILEP MPEKLSALGI EIVVNERYDV
PLTDAAPLVT KAKGAEADIF FANGFFPDSV QIVKAMRALD YNPKLIAQGV GSIIPAWVQE
LGADGYYVFS GTAVHPSLPF EGISRLNEVA RAKYNAPVAP IYFIFGYAWM QALQRGVEGA
QTLDQTAIRD WLKANQITTV AGTFTFDERG LPPPYNYLTQ VIDGKVELIW PPDVRTKEPI
YPKPAWGQ
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