Gene RoseRS_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1439 
Symbol 
ID5208393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1753797 
End bp1754468 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content54% 
IMG OID640595048 
Producthypothetical protein 
Protein accessionYP_001275785 
Protein GI148655580 
COG category[L] Replication, recombination and repair 
COG ID[COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0111191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATG TCAAAATAAC TATTCGTTTC CCATTGGCAA CTTCATTTCA TACGACCGGT 
AACCGCCGAC GATTGGGAGT AGACAAGACT CTAGCTCTAA GCACTGAAGG AGTACCAGTG
CTTCCAGCCA CAACGATCAA GGGCTTTCTA CGAGATTGTG CCGAGACTCT GTTGCGAACT
TGGGCACAGA GGGTCTGCTT GCCTCCTACC CCGATGACGA TGTGTTCAGA GAAGAATCTT
TGCATGGTCT GTCAGATCTT CGGTAACCCG CGCCATACCT CGCCACTGCG TTTTCGGGAC
GGCCAATTTG TCCAGAAACC AGACATCATG GAGCGAAGTG GAGTAAGCAT CAGCCGCAGC
CGGCGAGCGG CTCTGCCCCA GCGTCTCTTT TTTCTGGAGA CTACAGACCC GCAGCCGGGA
GAGGTGGTTG CAACTATTGA GGGTGACTTT GCCGATACCG AGTTGGCACG GCAGGCGACA
GCCCTGATTG TCCTTGCAGC CCGGTCAGGG TTTGCTATCG GCGCGGGTCG TACTCGTGGT
CTGGGATGGC TGGAGAGAGA CAAGATGCGG GTAGAGTCCA GGATCGATGA TGAGCAGGTG
GAAAACAGCC TTATAGAGCA ATATGCCCAT CTGTGGAGCG AAGGCAAGCA TGTGGTTGAA
AATCAAACCT GA
 
Protein sequence
MSHVKITIRF PLATSFHTTG NRRRLGVDKT LALSTEGVPV LPATTIKGFL RDCAETLLRT 
WAQRVCLPPT PMTMCSEKNL CMVCQIFGNP RHTSPLRFRD GQFVQKPDIM ERSGVSISRS
RRAALPQRLF FLETTDPQPG EVVATIEGDF ADTELARQAT ALIVLAARSG FAIGAGRTRG
LGWLERDKMR VESRIDDEQV ENSLIEQYAH LWSEGKHVVE NQT