Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1439 |
Symbol | |
ID | 5208393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1753797 |
End bp | 1754468 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640595048 |
Product | hypothetical protein |
Protein accession | YP_001275785 |
Protein GI | 148655580 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0111191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATG TCAAAATAAC TATTCGTTTC CCATTGGCAA CTTCATTTCA TACGACCGGT AACCGCCGAC GATTGGGAGT AGACAAGACT CTAGCTCTAA GCACTGAAGG AGTACCAGTG CTTCCAGCCA CAACGATCAA GGGCTTTCTA CGAGATTGTG CCGAGACTCT GTTGCGAACT TGGGCACAGA GGGTCTGCTT GCCTCCTACC CCGATGACGA TGTGTTCAGA GAAGAATCTT TGCATGGTCT GTCAGATCTT CGGTAACCCG CGCCATACCT CGCCACTGCG TTTTCGGGAC GGCCAATTTG TCCAGAAACC AGACATCATG GAGCGAAGTG GAGTAAGCAT CAGCCGCAGC CGGCGAGCGG CTCTGCCCCA GCGTCTCTTT TTTCTGGAGA CTACAGACCC GCAGCCGGGA GAGGTGGTTG CAACTATTGA GGGTGACTTT GCCGATACCG AGTTGGCACG GCAGGCGACA GCCCTGATTG TCCTTGCAGC CCGGTCAGGG TTTGCTATCG GCGCGGGTCG TACTCGTGGT CTGGGATGGC TGGAGAGAGA CAAGATGCGG GTAGAGTCCA GGATCGATGA TGAGCAGGTG GAAAACAGCC TTATAGAGCA ATATGCCCAT CTGTGGAGCG AAGGCAAGCA TGTGGTTGAA AATCAAACCT GA
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Protein sequence | MSHVKITIRF PLATSFHTTG NRRRLGVDKT LALSTEGVPV LPATTIKGFL RDCAETLLRT WAQRVCLPPT PMTMCSEKNL CMVCQIFGNP RHTSPLRFRD GQFVQKPDIM ERSGVSISRS RRAALPQRLF FLETTDPQPG EVVATIEGDF ADTELARQAT ALIVLAARSG FAIGAGRTRG LGWLERDKMR VESRIDDEQV ENSLIEQYAH LWSEGKHVVE NQT
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