Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1408 |
Symbol | |
ID | 5208360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1715284 |
End bp | 1715835 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595019 |
Product | hypothetical protein |
Protein accession | YP_001275758 |
Protein GI | 148655553 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.357709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00383006 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGGCAG GCGGGCAACT CCTGGTAATA ATGTCCATAA CCTTCGGGTT GCTGCTCCTG GGAATCGGTG TCTTCGCCCT TTTCCTTGGG CTGCGTCTTC TATGGGGTAT GCCTGCTGCT CTATCCCAAA CAAGCGGCGT GCGCCTGGCA GCGCGCTGCT GGCCCGCCGC ACCAGGCACA ATCATCGGCG CTGAGGTTCG CGTCGCGCCA GGGTCTGACG AGGAACCATT CTACGACGCG GTCGTGCGAT ACGCTTATAC CGTTCAGGGT CAGGAGTATG AAGGCGCGCA AGATGACCTG ACGTATGTCA GCAATGTGCA GGATGCGGCA CAGGCGATCG TGGCTCGCTA CCAGGTCGGG GCTTCCGTGC TGGTGTACTA CGATCCACAG GCGCCGCAAC GCGCGCTCAT CGACCGCAGC ATTCGTCCGC ATCATCTGGT CGGTCTGTCG CTCGCCGATC TGCTTTTCCT GCTGCTGGTG GCAGGAGGTC TGCTGGCGAT CCTGACGGGA CTGGCGATAC TGGCAGCGCC GGGACCGCCG CCTCCTGACT GA
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Protein sequence | MLAGGQLLVI MSITFGLLLL GIGVFALFLG LRLLWGMPAA LSQTSGVRLA ARCWPAAPGT IIGAEVRVAP GSDEEPFYDA VVRYAYTVQG QEYEGAQDDL TYVSNVQDAA QAIVARYQVG ASVLVYYDPQ APQRALIDRS IRPHHLVGLS LADLLFLLLV AGGLLAILTG LAILAAPGPP PPD
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