Gene RoseRS_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1408 
Symbol 
ID5208360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1715284 
End bp1715835 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content62% 
IMG OID640595019 
Producthypothetical protein 
Protein accessionYP_001275758 
Protein GI148655553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.357709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00383006 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGCAG GCGGGCAACT CCTGGTAATA ATGTCCATAA CCTTCGGGTT GCTGCTCCTG 
GGAATCGGTG TCTTCGCCCT TTTCCTTGGG CTGCGTCTTC TATGGGGTAT GCCTGCTGCT
CTATCCCAAA CAAGCGGCGT GCGCCTGGCA GCGCGCTGCT GGCCCGCCGC ACCAGGCACA
ATCATCGGCG CTGAGGTTCG CGTCGCGCCA GGGTCTGACG AGGAACCATT CTACGACGCG
GTCGTGCGAT ACGCTTATAC CGTTCAGGGT CAGGAGTATG AAGGCGCGCA AGATGACCTG
ACGTATGTCA GCAATGTGCA GGATGCGGCA CAGGCGATCG TGGCTCGCTA CCAGGTCGGG
GCTTCCGTGC TGGTGTACTA CGATCCACAG GCGCCGCAAC GCGCGCTCAT CGACCGCAGC
ATTCGTCCGC ATCATCTGGT CGGTCTGTCG CTCGCCGATC TGCTTTTCCT GCTGCTGGTG
GCAGGAGGTC TGCTGGCGAT CCTGACGGGA CTGGCGATAC TGGCAGCGCC GGGACCGCCG
CCTCCTGACT GA
 
Protein sequence
MLAGGQLLVI MSITFGLLLL GIGVFALFLG LRLLWGMPAA LSQTSGVRLA ARCWPAAPGT 
IIGAEVRVAP GSDEEPFYDA VVRYAYTVQG QEYEGAQDDL TYVSNVQDAA QAIVARYQVG
ASVLVYYDPQ APQRALIDRS IRPHHLVGLS LADLLFLLLV AGGLLAILTG LAILAAPGPP
PPD