| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1399 |
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| Symbol | |
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| ID | 5208351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1707878 |
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| End bp | 1708777 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595010 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001275749 |
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| Protein GI | 148655544 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0535811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000124146 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGTCG TTATCAGCGT CATGGCAATT ATTGCCGTGG AACTCTTCTT TGCCGGATTG
CGGCGCATCC GCACCCCCGG ATATGAAGCG CAGATTGCAC AGTACGGTTC GCTGGCGCAT
ACCGGGCCGC GCTCCCGCTA TGCGCGCTGG GTGCGCCCGT ATGCGCTGCG TCTCGCCAGC
AATGTGACTG CGCTGCGCGG TCTGACCGAT TTTGAGAAGA CTGCGCGTAT GCTGGATTAC
GCCGGCAATC CTGCAGGAAT GACCGTGCAC GAGTTTCACG GGGTGCAACT CTACGGCGGT
CTGGCAGGGT TATTGATCGG CGGGGTCTGG TTTGCACTGG GGTTGCCACT GGGTGCGATC
CTGCTGGTCA TTTTACCTCT CGGGGGCTTC TTCTACCCGC TGCTCTGGCT GCGCGGTCGG
GTCAAGCAGC GTCAGCATGC GATTACCGTG GCGTTGCCCG ATCTGCTTGA TATGCTGGCA
GTCTGCGTAT CGGCAGGCAT GGGCTTCGAC ATCGCTCTGA CGCTGTTGGT TGAGCGTGGG
GAGGGCCCGT TGTATGAAGA GATGGGGCGG ATGCTGCATG AATTGCAGAT GGGTGCGCCG
CGTGAGCAGG CATTTCGCAA TCTGGCGGCG CGCAACTCAT CAGACGCACT GCGCGGCTTT
ATCGACGCCC TGTTGCAGGC AGAGGAGTTG GGATCGCCAA TTGCCACAAC GCTCGAGCGT
CAGGCAGAGG ATATTCGGAC TGGTCGCCGC TACCGCGCGC GTGAAGAAGG CGCAAAGGCT
GCCACCAAGA TTACGCTGAT TGTGGTTGTA CTGGTGACCC CCTCGGTGCT CTGCCTGATT
ATCGCAGCCC TGGGCATGTC GATTATGCGC AGCACAAGAG GGTTGCCGCT GCCTGGGTGA
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| Protein sequence | MSVVISVMAI IAVELFFAGL RRIRTPGYEA QIAQYGSLAH TGPRSRYARW VRPYALRLAS
NVTALRGLTD FEKTARMLDY AGNPAGMTVH EFHGVQLYGG LAGLLIGGVW FALGLPLGAI
LLVILPLGGF FYPLLWLRGR VKQRQHAITV ALPDLLDMLA VCVSAGMGFD IALTLLVERG
EGPLYEEMGR MLHELQMGAP REQAFRNLAA RNSSDALRGF IDALLQAEEL GSPIATTLER
QAEDIRTGRR YRAREEGAKA ATKITLIVVV LVTPSVLCLI IAALGMSIMR STRGLPLPG
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