Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1392 |
Symbol | |
ID | 5208344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1701958 |
End bp | 1702581 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640595003 |
Product | hypothetical protein |
Protein accession | YP_001275742 |
Protein GI | 148655537 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000986889 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000859412 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCGACAGA TGGTGCATCT GATACACGAC GACCGGGGCG GCGTCGGTTT CAATCTGCTC TGGGTCTGCT TTATTATCAT TTTTCTGATC CCATTCTTCT GGGATGTTGG AAGTGTGCAT TATGCGCGTC GTTTTGCAGG AACCGGCGCT GACGGCGCTT CGCTTGCGGC TGCACAGGAG TACGCGCGCC ATTTGCAGTA TGTGCCAGCG TGGAATGGCA TATGGTACGG TCAATGTCCA CACGAGTGCA CTCCACAGCA AGTGGTGCTC CGTTATCGCG GATTGCCCGC CTTTGGCGCG CCGCCCGGCA TCGGGTATGG GCAGGCTCAG CAGTATGCCG CGCTCAATCG CGACGAACTG ACTGCCTATA GCTCGTGGCC GCAATTTGCG GGGCGCACGG TTCATGGCGT GCCCATTCCG TGGATTGTCG TCTATGTCGA AACGCTCCGT CCAGTGCATA CCGCATACGG TCCGATCTAC GGACGCGACT TCGAGGCGCC GAACCGCGCC AAAGCGGTGG CATACCTCTG GCGCTGGCAT AGCTGGCCAC GACGATGCAA CAAATGGTGC ACCACCTACG ATTTTACGTT CGAGTGGAAG ATCACGCTTG ATAAAGCGCG CTGA
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Protein sequence | MRQMVHLIHD DRGGVGFNLL WVCFIIIFLI PFFWDVGSVH YARRFAGTGA DGASLAAAQE YARHLQYVPA WNGIWYGQCP HECTPQQVVL RYRGLPAFGA PPGIGYGQAQ QYAALNRDEL TAYSSWPQFA GRTVHGVPIP WIVVYVETLR PVHTAYGPIY GRDFEAPNRA KAVAYLWRWH SWPRRCNKWC TTYDFTFEWK ITLDKAR
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