| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1338 |
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| Symbol | |
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| ID | 5208290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1648282 |
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| End bp | 1649064 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640594952 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001275691 |
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| Protein GI | 148655486 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.960839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCAT GTACCACCGT CGGTCGTCCT GCACCGCTAT CGCATCGACT GGTGCGAGCG
CTGCTGATCG CACCCGAATC CGCGCTCATC GCAGCGCTGC TGATCATCAA CCTCTTCGCT
CCATCCATCT GGATCGGGGC AGGAATGACC CTTTTGATCC TTATCTTTCT GACGCGCTTC
GCCGCACTGC ACCTTGCCAG CCTGGCGATC CGGCGCGCAC GCTGGAATGC AGCGGACGCG
CTGGCGACCG TGGCATACGT TCTGCATCCC CGCTCGCCGG ATGCGCTGGC GCTGCGGGGC
ATTGTGGCGC TCACCCGCGA CGACGCCAGC AGCGCGGTTG CTCTGCTCCG GCGCGCCCTG
GACCTGGCGC CGGATCGCGC CGCGTTCGCT CTTGCGCTGA GCAGCGCTTT ACTCGAACAG
GGAGAGGTCA GCGCCGCAGA ACGCGCCGCA CGTCGAGCGC TGGAACTGGA ACCGGCGAAT
GCTGCCGGGC ATCTCTGCCT GGCGCAGGCG CTGGACGCCG CTGGCGCTTC GCCTGAAACC
ATCGAGCAAC ATCTGCGTGA AGGGTTGGCG CACCACCCGG CGCCGGACGC AGAAGCATCG
CTGCGCTGTG CACTTGCGCA GCATCTGGCG CGTGAAGGGC GACTGGCTGA AGCGGCGCTG
GCGCTCAGCG CTGCGCGCGC CATGCTCCCC CGATGCAGCA TGGCGCACCG CACCGCAGTG
GGTCGCCACA TCGCCGAAAT CGAAGCAATA GTGCGCCCAC AGCGCGAAGA TCACGCTGCC
TGA
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| Protein sequence | MAPCTTVGRP APLSHRLVRA LLIAPESALI AALLIINLFA PSIWIGAGMT LLILIFLTRF
AALHLASLAI RRARWNAADA LATVAYVLHP RSPDALALRG IVALTRDDAS SAVALLRRAL
DLAPDRAAFA LALSSALLEQ GEVSAAERAA RRALELEPAN AAGHLCLAQA LDAAGASPET
IEQHLREGLA HHPAPDAEAS LRCALAQHLA REGRLAEAAL ALSAARAMLP RCSMAHRTAV
GRHIAEIEAI VRPQREDHAA
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