Gene RoseRS_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1253 
Symbol 
ID5208205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1539434 
End bp1539952 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content58% 
IMG OID640594869 
Producthypothetical protein 
Protein accessionYP_001275608 
Protein GI148655403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.033181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATGTC CGAGTTGCGA TGGGGTGATC GAGGAATCGG ACGTGCAGTT CTGCCCGTTC 
TGCGGCATGC AGATCCGCGC GTCGCAGGCA AGTGATCCAG ACCGTCGCGC ACACGCCACG
ACCGACGCAC CAGGCTCGTC GCGCCGTTCG CAGCTGCACC CGCTGCTAGA GATACTAAAG
AAAGACAGAC GCTATAGCTG GATAGTGAGC GAACAGCCGA TCAGCCCGGC GGCAAATCTC
AGTCTGATAT TCGCTCTTCT TGGTGTGTTT TCCTGTGTGC CGCTCGTCTT CTCGATCCTT
GCAATTGTCG TCGGTTATCG CGCGCTCGAT GAGATCGCCG CCTCGGATGG ACGGCTCGGC
GGGCGTGGAC GTGCAATCGC CAGCATTATT ATGGGGTGTA TTCAACTGGC GCTGCTCATA
CTCGGCTTCA TTCTGGTTGC GGTTTCCTCC TGGCTTCAGA AACAACCAGC AGACCTTCCT
TCCGCACAGG CAGTTTTTTT GATCGCACTG CTGGCGTAG
 
Protein sequence
MRCPSCDGVI EESDVQFCPF CGMQIRASQA SDPDRRAHAT TDAPGSSRRS QLHPLLEILK 
KDRRYSWIVS EQPISPAANL SLIFALLGVF SCVPLVFSIL AIVVGYRALD EIAASDGRLG
GRGRAIASII MGCIQLALLI LGFILVAVSS WLQKQPADLP SAQAVFLIAL LA