| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1180 |
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| Symbol | rplV |
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| ID | 5208131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1452291 |
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| End bp | 1452632 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594797 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001275537 |
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| Protein GI | 148655332 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.78172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.528873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGCGA AAGCAGTAAC CAAATATGTC CGCATCTCGC CGACAAAGGT GCGCCCGGTG
ATGGATCTGG TGCGCGGCAA GCCGGTCGAT CGGGCGCTGG CGATCCTTCG CTACCTGCCC
CACAAAGCGG CGCGCGAGAT CGCCCGCACG ATCGAGTCGG CACGGGCGAA TGCCACCAAC
AACTACGATA TGGCGCCCGA TGCGCTCATC GTGAAGTACA TCTTCGCCGA TGAAGGTCCG
GCGTTTAAAC GGATCATGCC GCGCGCCCGC GGTCGAGCCG ATCGCATTCG CAAGCGGACG
ACCCATATCA CGGTGATTGT CGATGACGGC GAGGAGATGT AG
|
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| Protein sequence | MQAKAVTKYV RISPTKVRPV MDLVRGKPVD RALAILRYLP HKAAREIART IESARANATN
NYDMAPDALI VKYIFADEGP AFKRIMPRAR GRADRIRKRT THITVIVDDG EEM
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