| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1176 |
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| Symbol | rpsQ |
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| ID | 5208127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1450545 |
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| End bp | 1450805 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640594793 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_001275533 |
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| Protein GI | 148655328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.198665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.172914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAG CGCGACGACG ACAATTCAAG GTCGGGCGAG TCGTCAGCAA TAAAATGCAG
AAGACGGTTG TGGTGGCGGT TGACTATCTG AAGCCGCATC CGCTCTATCG CAAAATCATT
CGCCGCACCA GCAAGTTCCA TGCGCACGAT GAGCAGCAGT GTCGGATCGG CGATATCGTG
CGCATCGGCG AAACTCGCCC GCTGAGCAAG ACCAAACGCT GGGAAGTGGT TGAGATTATC
AAGCGCAATG AGGAGGCCTG A
|
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| Protein sequence | MTEARRRQFK VGRVVSNKMQ KTVVVAVDYL KPHPLYRKII RRTSKFHAHD EQQCRIGDIV
RIGETRPLSK TKRWEVVEII KRNEEA
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