Gene RoseRS_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1082 
Symbol 
ID5208029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1346779 
End bp1347855 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content63% 
IMG OID640594696 
Producthypothetical protein 
Protein accessionYP_001275440 
Protein GI148655235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.985594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA GCGAGCAGTC TCTTTCGCGC TTTTGCACAT TCTGCGGTGC AGACCTGCCG 
CCCGGTCATC CGCGTTTCTG CATCGAATGC GGTCAGCCGG TTGAGTCGTC GCTGCGTGTT
GAGGATGCTG CACCTCATGC GACGACCGGA CCGACAGTAC GCCTGGCAAA TGCTCGCACC
GGGCAGATCG TTGTCGGCGG CACGGTGAAG TTACCGTCAT CAGGCGCTGT ACCGCCGGGG
TTGTGGTTTA CGCCGGAATT GCCCGGTCCT GACGATATTG TTGCAATCTA TGCGCCGTTA
CGCGCAGTTG TGGGAGGCTG GAGCGGTCTG ACCGACCACG GCTGGAAGAA ATGTGACCAG
GAGTGGGCAG CGGATGGAAC CAGCCGCACG CTGGTGCGAT TCACAGTTGA GCGCGTCTGG
TTTGCAGCGC CGGGTGCAGC GCACAATATG CGCTTGCAGG TGCAGATCGG GGCTGTGGCG
CACGCCGATG AGGGGCGCAC ACGACGCGGA TTCCGCTACC GGATTGGCGC CGATCCGCCG
ATGGATGTCG TTGCTGCCTG GTGGATCGAG GGGCAGACGC CGCGCTTTGA TCTGCCAGTG
CCGCAGATCC AGATCATGGC GCCGCCGCGT GTTCCGCGCG TGTCGGATTA TCCTGAGACG
GTGCGCCGCA TGAACGCCCG CGAGGCGGAA ACGTGGGCGC GTCAGGGGGA AGTGCACGGG
CTGTTCCGTA TGCCGAACAG CGCCCAGCAG CGCACGCCAG CGGGTCGCGG CATCCCGCTG
ATCGAAGTCT CGGCGCTTGG CGCGTTGCTT CGTTTTGGCG GGGCAGTCGA GCGCCTCTAC
CGGGTGCAAA TGTTTCGTCC GCTGGTGTGT GACGCTGCAA CCTGGAAGCG CCTCAAACAG
CGGATCGCGC AGGAGGCGGC GAGTCTGGGT CTCGATATGA ACACAGACGC AATGATCGAA
TGGTGGCTTG ATCGCGAGGG GTACGATGGT GCGCTCTTCG AGCGCAATGC GCATCCGTAT
GGCGGCGGTC GCGCCGCGAT CGCCTTTCGC CGCAGCCAGA TCGCCTTGAT TGAATAA
 
Protein sequence
MNSSEQSLSR FCTFCGADLP PGHPRFCIEC GQPVESSLRV EDAAPHATTG PTVRLANART 
GQIVVGGTVK LPSSGAVPPG LWFTPELPGP DDIVAIYAPL RAVVGGWSGL TDHGWKKCDQ
EWAADGTSRT LVRFTVERVW FAAPGAAHNM RLQVQIGAVA HADEGRTRRG FRYRIGADPP
MDVVAAWWIE GQTPRFDLPV PQIQIMAPPR VPRVSDYPET VRRMNAREAE TWARQGEVHG
LFRMPNSAQQ RTPAGRGIPL IEVSALGALL RFGGAVERLY RVQMFRPLVC DAATWKRLKQ
RIAQEAASLG LDMNTDAMIE WWLDREGYDG ALFERNAHPY GGGRAAIAFR RSQIALIE