Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1034 |
Symbol | rplT |
ID | 5207980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1271753 |
End bp | 1272106 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640594648 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_001275393 |
Protein GI | 148655188 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCG TCAAACGTGG CGTCATGGTG CGTAAGCGCC ACAAAAAGTT GCTCGAACAG GCAAAAGGGT ATCGCGGCAG TCGCAGTCGC CGCGTCAAGG TGGCGCGCGA AACGGTGATG AAGGCGCTCT GGTATGCCTA TCGCGACCGG CGCAACCGCA AGCGTGATTT TCGCCGCCTC TGGATTGTGC GTATCAATGC CGCCGCCCGA ATGCACGGCA TGTCGTATAG CCGCTTTATG AACGGTCTCA AGCGCGCTGG CATCGATCTT GATCGCAAGA TTCTCGCCGA TATGGCGGTG CGCGACCCGG CGGCGTTTAG CCGCGTCGTC GAACAGGCGC GACAGGCGGT GTGA
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Protein sequence | MARVKRGVMV RKRHKKLLEQ AKGYRGSRSR RVKVARETVM KALWYAYRDR RNRKRDFRRL WIVRINAAAR MHGMSYSRFM NGLKRAGIDL DRKILADMAV RDPAAFSRVV EQARQAV
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