Gene RoseRS_1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1034 
SymbolrplT 
ID5207980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1271753 
End bp1272106 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content61% 
IMG OID640594648 
Product50S ribosomal protein L20 
Protein accessionYP_001275393 
Protein GI148655188 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCG TCAAACGTGG CGTCATGGTG CGTAAGCGCC ACAAAAAGTT GCTCGAACAG 
GCAAAAGGGT ATCGCGGCAG TCGCAGTCGC CGCGTCAAGG TGGCGCGCGA AACGGTGATG
AAGGCGCTCT GGTATGCCTA TCGCGACCGG CGCAACCGCA AGCGTGATTT TCGCCGCCTC
TGGATTGTGC GTATCAATGC CGCCGCCCGA ATGCACGGCA TGTCGTATAG CCGCTTTATG
AACGGTCTCA AGCGCGCTGG CATCGATCTT GATCGCAAGA TTCTCGCCGA TATGGCGGTG
CGCGACCCGG CGGCGTTTAG CCGCGTCGTC GAACAGGCGC GACAGGCGGT GTGA
 
Protein sequence
MARVKRGVMV RKRHKKLLEQ AKGYRGSRSR RVKVARETVM KALWYAYRDR RNRKRDFRRL 
WIVRINAAAR MHGMSYSRFM NGLKRAGIDL DRKILADMAV RDPAAFSRVV EQARQAV