Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1013 |
Symbol | |
ID | 5207959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1239164 |
End bp | 1241512 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640594627 |
Product | hypothetical protein |
Protein accession | YP_001275372 |
Protein GI | 148655167 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.757168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACG ACAGCACTCC AGTCTACACC GACGCCGATT TCATCAAGGA TGATCTGCGT CGCTGCGATC TGGTGATGAA AGGCGGGATC ACCAGCGGTA TCGTATACCC GCCTGCAATC ATCGAGCTTG CCACGCGCTA CCGTTTTGTC AATGTCGGCG GCACGTCGGC AGGCGCGATT GCTGCCGCAG CCGCTGCCGC TGCAGAATGT GGACGCGATG TGCCATACGC CGGGTATCGC AGCAGTTTTC TGCGGCTTGA CCGATTGCGC GCCTGGCTTG GCGAACGCGA GGATCATATT CCTGGGCTGT TTCAACCGCT GCCACGTATG AAACCCCTGT TCAACGTCCT GCTCGACCTG ACTATCGCGT CCAGAACACA ATCCCAGACT TCTCCGGGGC GTCCATCGAC GCACATGCCT GGCGCAGGCG CACTCCGCAT TCCTGCGATT GGAATGCGCT TTGCCTGGCG CGCCCTGACA CTGTTCCTTC GCAGTGCACG GGTGTTGATA CGCCATCATC CGCAGGTGAC GCTGGGAGTC GGCGTGATGG TTGTGTTAAT CGTTCTTGCC TTCCAGATGC TGATTTCAAT ATCCAACGAT GGTTTCGCTT CTCCAATACA CGTCGTCGGA TGGGTGGCGT CTGCCATTCT GATCGGCGCG ATTGTCGGCA TCCTGGCAGG CGCAGGGCAT CTTGTCTGGC TGGCGGTTTA CGAACTGCCG CGCAACCTGT TTGGGCTGTG CAGCGGTCAC GTCGCAGACG CATCACCGAC AGGATGGCCG CCGACACTGG GAGACGATCA GGGGCGTGGC AGACCTCCCG CGCTGACCGA CTGGCTCCAC GCGGTCATCA ACGGGCTGGC GGGACGCGAC GCGCGCCAGC CGCCGTTGAC GTTCGGCGAT CTGGAAAGGA AGGGCATTGC GCTGCGCACG ATGACCAGCA ACCTGAGTGA GCACATGCCG TATGTGCTGC CGAAAGACCT GGGGCGGTTT CTCTTCGATC CGAACGAGTG GGCGCGCCTG TTTCCCGATG TTGTTGTCGA ACATCTGCGC GCACACAGCG CTGGCGCCGT ATACCGCATC GCCGATGCGC GGGGCGCTTC GCAAACGTTG CTGCCGCTCC CTGCATGGCG TGATATACCG GTGGTTGTGG GAGCGCGCAT GAGCTTGAGT TTTCCGCTCC TGATCGCCGC CGTGCCGCTC TACACCATCA GCGTCGCCGG GCAACGCGAG GCGAGCGCCG GAAAGACTCT GCGCGCGGAT CATGTTCAGC GTCATGTCTT CAGTGATGGC GGGATTGCCA GCAACTTCCC GATCCATTTC TTCGACCGCT GGCTGCCGAC CCATCCGACC TTTGGCATCA ACCTGGTGCA ACTCCCTGCC GATGAAGCCG ACAATGAACA GTTTCTCCAG ACCCTCCTTG CCGACGATGT TGCGGAAGCC GCAGCAGAAC CGGTGCAACC CGGCGTTACT GTCAAACAGG CGCATCTTGG GCGCACCGAC TTTCGTGCTG CCGCGCCCGC ACCGCCGCCA CAGATGCGCT CCGCCGCACC GTTCAGCGAT CCGCGAGGTG AGGTGTATCT GCCGCCTGCT GGACCGGGCG ATGATTACAT CGAATGGCGC GCAATCGGCA GCCTTCCGGC GTTCTTCTGG TCGATCTTCG GCACAGCGCA GAACTACCGC GACACGGCGC AGGCGCGCCT GCCAGGGTAC AACGAGCGCG TGGTGCGCGT GCGGCTGAAA CCCGATGAAG GCGGACTCAA CCTGCGCATG CCGCGCCAGA CCATCGCGGC GATTATGCAC AAGGGGCAAC TTGCCGGGCG CGCGTTGCTG CCGCAGGAAC CAGAGGCAGC CGGGAGAAGG CGCGGCGGGT TCACCTTCGA CGATCATCGC TGGGTGCGCC TCGTGACGCT CCTTTCGGAG ATCGATCAGC AACTCAACGA TATGCGCTCC GCCTACGACG ATGTTCAGGC GGACTATGCC ACGTTTCTGC GCAACGCGCT GACGAATGAC AATCTGCCGG TTTGCCCGCC CTACTACGCT GGCAGCCCGG AAGAACGCGC GCTCTTTGCG CGGCGCATCG AGGCATTGAT TGCGCTCTGC ACCCTGTGGA GCGATCTCGA TGAAGAAACA ACGGCGCGCC TCAATACGAT CCTGTTGCGC ATGAACAAAC GGACGCTGCA GGACATGGCG CGTCTGCTCG ATCAACCCGA TGACCAGGAG GCGTTGAGCG GTCTGCACCA CTGGCTCGCT GCGATGCATG CGGAAAAAGT TCGCCTGGCA AAAGCGGCGG AACGCGAGTC ATCGCCGGTT GAGGACATGA TCGACCTGCG GGTGATGCCG ACGATTTGA
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Protein sequence | MSHDSTPVYT DADFIKDDLR RCDLVMKGGI TSGIVYPPAI IELATRYRFV NVGGTSAGAI AAAAAAAAEC GRDVPYAGYR SSFLRLDRLR AWLGEREDHI PGLFQPLPRM KPLFNVLLDL TIASRTQSQT SPGRPSTHMP GAGALRIPAI GMRFAWRALT LFLRSARVLI RHHPQVTLGV GVMVVLIVLA FQMLISISND GFASPIHVVG WVASAILIGA IVGILAGAGH LVWLAVYELP RNLFGLCSGH VADASPTGWP PTLGDDQGRG RPPALTDWLH AVINGLAGRD ARQPPLTFGD LERKGIALRT MTSNLSEHMP YVLPKDLGRF LFDPNEWARL FPDVVVEHLR AHSAGAVYRI ADARGASQTL LPLPAWRDIP VVVGARMSLS FPLLIAAVPL YTISVAGQRE ASAGKTLRAD HVQRHVFSDG GIASNFPIHF FDRWLPTHPT FGINLVQLPA DEADNEQFLQ TLLADDVAEA AAEPVQPGVT VKQAHLGRTD FRAAAPAPPP QMRSAAPFSD PRGEVYLPPA GPGDDYIEWR AIGSLPAFFW SIFGTAQNYR DTAQARLPGY NERVVRVRLK PDEGGLNLRM PRQTIAAIMH KGQLAGRALL PQEPEAAGRR RGGFTFDDHR WVRLVTLLSE IDQQLNDMRS AYDDVQADYA TFLRNALTND NLPVCPPYYA GSPEERALFA RRIEALIALC TLWSDLDEET TARLNTILLR MNKRTLQDMA RLLDQPDDQE ALSGLHHWLA AMHAEKVRLA KAAERESSPV EDMIDLRVMP TI
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