Gene RoseRS_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1013 
Symbol 
ID5207959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1239164 
End bp1241512 
Gene Length2349 bp 
Protein Length782 aa 
Translation table11 
GC content62% 
IMG OID640594627 
Producthypothetical protein 
Protein accessionYP_001275372 
Protein GI148655167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.757168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG ACAGCACTCC AGTCTACACC GACGCCGATT TCATCAAGGA TGATCTGCGT 
CGCTGCGATC TGGTGATGAA AGGCGGGATC ACCAGCGGTA TCGTATACCC GCCTGCAATC
ATCGAGCTTG CCACGCGCTA CCGTTTTGTC AATGTCGGCG GCACGTCGGC AGGCGCGATT
GCTGCCGCAG CCGCTGCCGC TGCAGAATGT GGACGCGATG TGCCATACGC CGGGTATCGC
AGCAGTTTTC TGCGGCTTGA CCGATTGCGC GCCTGGCTTG GCGAACGCGA GGATCATATT
CCTGGGCTGT TTCAACCGCT GCCACGTATG AAACCCCTGT TCAACGTCCT GCTCGACCTG
ACTATCGCGT CCAGAACACA ATCCCAGACT TCTCCGGGGC GTCCATCGAC GCACATGCCT
GGCGCAGGCG CACTCCGCAT TCCTGCGATT GGAATGCGCT TTGCCTGGCG CGCCCTGACA
CTGTTCCTTC GCAGTGCACG GGTGTTGATA CGCCATCATC CGCAGGTGAC GCTGGGAGTC
GGCGTGATGG TTGTGTTAAT CGTTCTTGCC TTCCAGATGC TGATTTCAAT ATCCAACGAT
GGTTTCGCTT CTCCAATACA CGTCGTCGGA TGGGTGGCGT CTGCCATTCT GATCGGCGCG
ATTGTCGGCA TCCTGGCAGG CGCAGGGCAT CTTGTCTGGC TGGCGGTTTA CGAACTGCCG
CGCAACCTGT TTGGGCTGTG CAGCGGTCAC GTCGCAGACG CATCACCGAC AGGATGGCCG
CCGACACTGG GAGACGATCA GGGGCGTGGC AGACCTCCCG CGCTGACCGA CTGGCTCCAC
GCGGTCATCA ACGGGCTGGC GGGACGCGAC GCGCGCCAGC CGCCGTTGAC GTTCGGCGAT
CTGGAAAGGA AGGGCATTGC GCTGCGCACG ATGACCAGCA ACCTGAGTGA GCACATGCCG
TATGTGCTGC CGAAAGACCT GGGGCGGTTT CTCTTCGATC CGAACGAGTG GGCGCGCCTG
TTTCCCGATG TTGTTGTCGA ACATCTGCGC GCACACAGCG CTGGCGCCGT ATACCGCATC
GCCGATGCGC GGGGCGCTTC GCAAACGTTG CTGCCGCTCC CTGCATGGCG TGATATACCG
GTGGTTGTGG GAGCGCGCAT GAGCTTGAGT TTTCCGCTCC TGATCGCCGC CGTGCCGCTC
TACACCATCA GCGTCGCCGG GCAACGCGAG GCGAGCGCCG GAAAGACTCT GCGCGCGGAT
CATGTTCAGC GTCATGTCTT CAGTGATGGC GGGATTGCCA GCAACTTCCC GATCCATTTC
TTCGACCGCT GGCTGCCGAC CCATCCGACC TTTGGCATCA ACCTGGTGCA ACTCCCTGCC
GATGAAGCCG ACAATGAACA GTTTCTCCAG ACCCTCCTTG CCGACGATGT TGCGGAAGCC
GCAGCAGAAC CGGTGCAACC CGGCGTTACT GTCAAACAGG CGCATCTTGG GCGCACCGAC
TTTCGTGCTG CCGCGCCCGC ACCGCCGCCA CAGATGCGCT CCGCCGCACC GTTCAGCGAT
CCGCGAGGTG AGGTGTATCT GCCGCCTGCT GGACCGGGCG ATGATTACAT CGAATGGCGC
GCAATCGGCA GCCTTCCGGC GTTCTTCTGG TCGATCTTCG GCACAGCGCA GAACTACCGC
GACACGGCGC AGGCGCGCCT GCCAGGGTAC AACGAGCGCG TGGTGCGCGT GCGGCTGAAA
CCCGATGAAG GCGGACTCAA CCTGCGCATG CCGCGCCAGA CCATCGCGGC GATTATGCAC
AAGGGGCAAC TTGCCGGGCG CGCGTTGCTG CCGCAGGAAC CAGAGGCAGC CGGGAGAAGG
CGCGGCGGGT TCACCTTCGA CGATCATCGC TGGGTGCGCC TCGTGACGCT CCTTTCGGAG
ATCGATCAGC AACTCAACGA TATGCGCTCC GCCTACGACG ATGTTCAGGC GGACTATGCC
ACGTTTCTGC GCAACGCGCT GACGAATGAC AATCTGCCGG TTTGCCCGCC CTACTACGCT
GGCAGCCCGG AAGAACGCGC GCTCTTTGCG CGGCGCATCG AGGCATTGAT TGCGCTCTGC
ACCCTGTGGA GCGATCTCGA TGAAGAAACA ACGGCGCGCC TCAATACGAT CCTGTTGCGC
ATGAACAAAC GGACGCTGCA GGACATGGCG CGTCTGCTCG ATCAACCCGA TGACCAGGAG
GCGTTGAGCG GTCTGCACCA CTGGCTCGCT GCGATGCATG CGGAAAAAGT TCGCCTGGCA
AAAGCGGCGG AACGCGAGTC ATCGCCGGTT GAGGACATGA TCGACCTGCG GGTGATGCCG
ACGATTTGA
 
Protein sequence
MSHDSTPVYT DADFIKDDLR RCDLVMKGGI TSGIVYPPAI IELATRYRFV NVGGTSAGAI 
AAAAAAAAEC GRDVPYAGYR SSFLRLDRLR AWLGEREDHI PGLFQPLPRM KPLFNVLLDL
TIASRTQSQT SPGRPSTHMP GAGALRIPAI GMRFAWRALT LFLRSARVLI RHHPQVTLGV
GVMVVLIVLA FQMLISISND GFASPIHVVG WVASAILIGA IVGILAGAGH LVWLAVYELP
RNLFGLCSGH VADASPTGWP PTLGDDQGRG RPPALTDWLH AVINGLAGRD ARQPPLTFGD
LERKGIALRT MTSNLSEHMP YVLPKDLGRF LFDPNEWARL FPDVVVEHLR AHSAGAVYRI
ADARGASQTL LPLPAWRDIP VVVGARMSLS FPLLIAAVPL YTISVAGQRE ASAGKTLRAD
HVQRHVFSDG GIASNFPIHF FDRWLPTHPT FGINLVQLPA DEADNEQFLQ TLLADDVAEA
AAEPVQPGVT VKQAHLGRTD FRAAAPAPPP QMRSAAPFSD PRGEVYLPPA GPGDDYIEWR
AIGSLPAFFW SIFGTAQNYR DTAQARLPGY NERVVRVRLK PDEGGLNLRM PRQTIAAIMH
KGQLAGRALL PQEPEAAGRR RGGFTFDDHR WVRLVTLLSE IDQQLNDMRS AYDDVQADYA
TFLRNALTND NLPVCPPYYA GSPEERALFA RRIEALIALC TLWSDLDEET TARLNTILLR
MNKRTLQDMA RLLDQPDDQE ALSGLHHWLA AMHAEKVRLA KAAERESSPV EDMIDLRVMP
TI