| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0944 |
|---|
| Symbol | |
|---|
| ID | 5207890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1164868 |
|---|
| End bp | 1165701 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640594558 |
|---|
| Product | Zn-dependent hydrolase of the beta-lactamase fold-like protein |
|---|
| Protein accession | YP_001275303 |
|---|
| Protein GI | 148655098 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTTG TGCGTGATGC AGCGTTGATC GCGCAGATCG ACAGACTGAC CGTGCCGCAT
GGTCAGGTGG CTCTCTGGTC GCTGGGGCAG GCGGGATGTG TGGTGAAGGG CGGCAACACA
ATCGCCTACA TCGATCCATA CCTGTCCAAC TCGGTCGAGG CGCTTGGCGG TCCGCCGCGA
CGGTTTCCCA TACCGCTCGA TCCGGCGCTG GTCACCCACG CACAGGTGGT GCTGACGACG
CACGAGCATC TCGATCATAC CGATGCTGCA ACCCTGGCGC CGCTTATGTC GGCATCACCC
CAGGCTACGC TGGTGACATC GCTTCAAGGA CGGCAGATCG CGCGCGATGC TGGCATCCCG
GACGAACGGA TCATCACGCC GCGTCTGGGT GAACGGGTCG AACTTGCCGG GCTTGCGTTC
ACCGCAATGC CGGCTGCCCA TTATGCGTAT GAAGTCGATG CCGATGGACA CTCACGCTGG
ATGGGGTTCA TCATCGAGTG CAACGGTGTG ACCGTCTATC ACAGTGGTGA TACGATCATC
TTCCCGGAAC TGCTGGCGGC GCTTGTCGGG CGCGTGATCG ACATTGCGCT CCTGCCGATC
AATGGGCGTG ATTTCTTTCG TGAGCACGAG GGGATCATCG GCAACCTGTG GCCCGGAGAG
GCGGTCGAAC TGGCGAAAGC CATCGATGCA CGGGTGCTGA TCGGCATTCA CAACGATCTT
TTTGCCGGGA ATCGTGTTTC GCCCGGTATG TTGTTCGATG AACTGGATCG GCGCGCTCCG
TTTATGCGCT GTCATCTGTT GCAACCGGGT GAATTGTACC TGTATGCCGG TTGA
|
|---|
| Protein sequence | MTLVRDAALI AQIDRLTVPH GQVALWSLGQ AGCVVKGGNT IAYIDPYLSN SVEALGGPPR
RFPIPLDPAL VTHAQVVLTT HEHLDHTDAA TLAPLMSASP QATLVTSLQG RQIARDAGIP
DERIITPRLG ERVELAGLAF TAMPAAHYAY EVDADGHSRW MGFIIECNGV TVYHSGDTII
FPELLAALVG RVIDIALLPI NGRDFFREHE GIIGNLWPGE AVELAKAIDA RVLIGIHNDL
FAGNRVSPGM LFDELDRRAP FMRCHLLQPG ELYLYAG
|
|---|
| |