Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0682 |
Symbol | |
ID | 5207620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 847362 |
End bp | 847832 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594296 |
Product | NUDIX hydrolase |
Protein accession | YP_001275049 |
Protein GI | 148654844 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0132833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0334373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCA ATTACACCGC CTGGCTGCGC AGTTATGTTG GTCATCAACG CCTGTTGCAA CTTGCTGCGA GCGCGTTTAT TCGAAATGAT CGAGGGTACG TGCTGCTTGG GCAACGTTCT GACGTGATGC TCTGGGCGCC GCCGTCGGGC GTGGTGCAAC TGGGGGAAAC GCCGGCGCGC ACGCTGGTGC GCGAAGTGCT GGAAGAAACC GGCTTGCACA TTGTCGTTGA GCGCCTGATC GGGTTGTATA CCGGGCGCGA TTTTGAGTGG ACCTATCCCA ACGGCGATCA GGCGCAGATC GTCAGCGCCT TCTTCGCATG CCGCGTCGTT GGCGGCATGC TGCAACCAGA CCACGCCGAA TTTGTGTCGC TCGACTATTA CCCGCCTGAC CGGTTGCCGC CGTTGATGCC GCGCTATGTG CGTATGCTGC GCGATGCGTT TGCCGGGCAT ACTGAGGCGA TGTTCGATTA A
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Protein sequence | MTINYTAWLR SYVGHQRLLQ LAASAFIRND RGYVLLGQRS DVMLWAPPSG VVQLGETPAR TLVREVLEET GLHIVVERLI GLYTGRDFEW TYPNGDQAQI VSAFFACRVV GGMLQPDHAE FVSLDYYPPD RLPPLMPRYV RMLRDAFAGH TEAMFD
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