Gene RoseRS_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0682 
Symbol 
ID5207620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp847362 
End bp847832 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content59% 
IMG OID640594296 
ProductNUDIX hydrolase 
Protein accessionYP_001275049 
Protein GI148654844 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0132833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0334373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA ATTACACCGC CTGGCTGCGC AGTTATGTTG GTCATCAACG CCTGTTGCAA 
CTTGCTGCGA GCGCGTTTAT TCGAAATGAT CGAGGGTACG TGCTGCTTGG GCAACGTTCT
GACGTGATGC TCTGGGCGCC GCCGTCGGGC GTGGTGCAAC TGGGGGAAAC GCCGGCGCGC
ACGCTGGTGC GCGAAGTGCT GGAAGAAACC GGCTTGCACA TTGTCGTTGA GCGCCTGATC
GGGTTGTATA CCGGGCGCGA TTTTGAGTGG ACCTATCCCA ACGGCGATCA GGCGCAGATC
GTCAGCGCCT TCTTCGCATG CCGCGTCGTT GGCGGCATGC TGCAACCAGA CCACGCCGAA
TTTGTGTCGC TCGACTATTA CCCGCCTGAC CGGTTGCCGC CGTTGATGCC GCGCTATGTG
CGTATGCTGC GCGATGCGTT TGCCGGGCAT ACTGAGGCGA TGTTCGATTA A
 
Protein sequence
MTINYTAWLR SYVGHQRLLQ LAASAFIRND RGYVLLGQRS DVMLWAPPSG VVQLGETPAR 
TLVREVLEET GLHIVVERLI GLYTGRDFEW TYPNGDQAQI VSAFFACRVV GGMLQPDHAE
FVSLDYYPPD RLPPLMPRYV RMLRDAFAGH TEAMFD