Gene RoseRS_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0605 
Symbol 
ID5207543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp752274 
End bp753542 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content64% 
IMG OID640594224 
Producthypothetical protein 
Protein accessionYP_001274977 
Protein GI148654772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00389442 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAACATC TCCGGCAAGC GACTCTCCTT ATTGCGCTGG TTGTTCTGAC CGCCTGCACC 
GGACCTTCTG CCGCCGTGCC GACCGCCGCG CCGCCGACAG GTGCGCCAAC CGCTGCACCG
CTGACTGCCC CTGCCACCGC GTCCCCCGCC GAAGCGACCC CTGCGCCGCA ACCGGCGCCA
ACGGCGCCGC AACCAACTGC TGGCATCCTG CCTGCGCCGC TCTACGTCCT TGCTGGCGGA
CAGATTGTGC GCATCGAGCG TGACGGGGTG ACGCGCAAAC AGATTACCGA CGAACCGCCG
CCTGCCCCCG ACGCGCTGGC GATTGTGTGG TTCGATGTAT CGCCGGTGGA TGGAACGATC
GTCTATGTCG TTCAGGGCGT TGGAGCGCCG CCCTTGCTGG TGCGCACCGC AGCCGACGGC
AGCAATCGCA CCGTTCTGAG CGACAACCTG TACATCACCT CGCCGCTTAT CTCCCCTGAT
GGCACAACGA TCGCAGTGGG CGTTTCCGAA GACTATGAGC GCCCTGGATC ACAAACCCCT
GGTATCTATG CACTGCCAAT CGCTGGCGGC GCACCGCGCC TGATCCTGGC AGACATTCCG
GCAACCGATC CCACGACAGA GGGAGGCGAC GGACGAGGAT TCACAGCGGT TGCCTGGTCG
CCGGACGGCA CGAAACTGCT GGCGAACGCT TACTCGCTCT CGGTTGAACT GTGTGAACTG
GCAATCGTCG ATGTGGCGAG CGGCGACCAG GTCTACCTGG GTGATCGCGC CGCAAACCTG
AAATCTGCCT GCACCCCTGC CGCCTGGTCG CCGGATGGCA GGACCGTCTT GTTCAACACC
GGCGATCCAG CATTGGCGCT TCCCGACCCC GGTATCTGGC GCTACGATGT TTCCGGTGGA
AGCATCAGCA GCCTGCCGGT TGAACCGGAC AACGCCATCA TCTATGCACC GCACATTGCA
GGCGACACAC TGTACGCATT CGTTGCGTCT ACTGATGGAA CCAATCCCGT CTACTCACCT
GCCGCTCCGG AGCCGGCACT CTCCTACACA CTGAGCAGCG TTCCGCTGAC CGGCGGAACC
TGGACGGCGC TGCGGAACGA TACGCACAGT CTGTTCAACG CACTCTGGGC GCCTGACGGC
TCAGGGGTCG TTGTATTCGG GGGCGATGAT CCGACCAAAA CACAAGTGCT CTGGCTCGCC
AGCGACGGAT CACCGGCGGT CGAACTGTAC ACTGGAACGG ATCTCTACGC GGCTCGCTGG
GCGCCGTAG
 
Protein sequence
MKHLRQATLL IALVVLTACT GPSAAVPTAA PPTGAPTAAP LTAPATASPA EATPAPQPAP 
TAPQPTAGIL PAPLYVLAGG QIVRIERDGV TRKQITDEPP PAPDALAIVW FDVSPVDGTI
VYVVQGVGAP PLLVRTAADG SNRTVLSDNL YITSPLISPD GTTIAVGVSE DYERPGSQTP
GIYALPIAGG APRLILADIP ATDPTTEGGD GRGFTAVAWS PDGTKLLANA YSLSVELCEL
AIVDVASGDQ VYLGDRAANL KSACTPAAWS PDGRTVLFNT GDPALALPDP GIWRYDVSGG
SISSLPVEPD NAIIYAPHIA GDTLYAFVAS TDGTNPVYSP AAPEPALSYT LSSVPLTGGT
WTALRNDTHS LFNALWAPDG SGVVVFGGDD PTKTQVLWLA SDGSPAVELY TGTDLYAARW
AP