| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0583 |
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| Symbol | |
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| ID | 5207521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 724200 |
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| End bp | 728201 |
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| Gene Length | 4002 bp |
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| Protein Length | 1333 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594202 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001274955 |
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| Protein GI | 148654750 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.204849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.7877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGG ACATGCACGT GCGACGGTTT CCGTTATATG TGGGAGTGGT TGCAATCGTT
GCTGTCATCG CTTTCGTCGT TGCGAACGCA GTGCAACTGT TCAGCGATCC CCTTCGGGAT
TGGATTGTGC AGATGTACAA TGCCGATCCG CTCCGCTTTA TCGTCGCCAG CATCCTGATC
TTCGCTTTTA TTGCAGCGGG CGCGATCTGG ATTGCCTACC AGCAATATCG CGGACAGCAG
CCTGAGAATG CTGATCTATC CGGTTTCAAG GAAGCCTCTA CCATCCGTCT TTTGCAGTTG
CCTGAAAATC TCAGTGATGA CCTGAAGGCT CGAGAGTTCA TACCGGCGAC CCGGCAGAAA
GAGCAGCGGG CGCTGACAGA CATGATCCTG ACCGTGCCGA AACAGTCTGC GCTCAAGGCA
TTCCTCCATG CCATTACCTT CCGGCGGCTG TTTCGTCCGG CAAGCGTGCC AGTTGCGGTG
GTGACCGGGA TTGGCGGCAT TGGGAAAACG TCGCTGGCAC TGTTTACCAG TTATGACCGG
CGGATCAGAC AGGCTTACCC TGGCGGTCGT TTCTACTTTG ACGCTGCGGG CATCTACCCT
GAACATGCCA GTGACACAAC AGCCCAGGTC TTGTTTCGCT TCCTTGTCGG CGCCGGGATT
GACAACAAAC AGATCAACCA GGCCCTTGGC CTGCCTGCCA GCGAAGAAGA TCGAGCCAGG
CAATTCGAGC GCCTGACGGC TCAAAAAGAC GATCCTGATG TAACAGATTT CTTACAGAGG
TTATACGTCC GGTCGCTGAT CGGGAAACAC CGACTGATCA TTATTGACAA TCCTCCTAAT
ACGGCGGACT TAAGCGCATT TGAGCCACCA GAGGGCAATG CGCTGCTGGT CATTACCCGG
CCCGAACACC CGCTTTATAA ACTGCGGCGC ATGCCTCAGC TTCGACTGAA ACCGATGGAC
GAGCCGGAGT CACAGCGCAT CATCAAGAAG GAGTGGCCAG CAGATCAGAC GATTTCATGG
AATCCTGACT CGCCCGATGG CAGATCTGTC TGTCAGCGCA TTCATCGGCT TGGCAGCGGC
ATTCCCCTTG TGGTGCTGGT GCTCAGCCGG ATGTTGAAGA ATGAAGCCGA AGATGGCGGG
AGTCTCGAAG CGGCTGTACG TTATCTTTCT CAACTGGAAC ATGACCACGC GGCCGGCGCA
TGGACATTCA GCGCGTTTCT CAACCGGCTG CTACAGCTGC CCTATAGTGC TGAACCCAAC
CGGGCAACGG TTGAAGAGGT CTTTCGCCTC AGCTATGTTC GGTTGACCGA GGATGCCCAA
CGAATGTTCC GGTCGCTGGC TATCTTTAGC GGCCTTCATT TCGACGAACG TCTGGCGGTC
ACCGTTGGGA GTGGAACTGA CGAGACCTTC AGGCAACTCC TGCGGAGTGG TCTGGTGGAG
CGGGCGCCTG ATTCCCAACG CTTCTACCTG TACGACCCGA TCGCATTATT CGCGCGCACG
TTACTGCATC AATCGCCCGA TGAGCCGCAA GAGGTCGTTG CGCGGTATGC CGCCTTCTTT
GCCGACCTTG CCGATCAGAC CGAAGCCCGT TTCCGCGCTG CGAGCGATCA GGCGGAGCGC
CAGGCAATCG TCAGCGCGTT GGCGACAGAG GCGATCCACC TGCGTCGCTG CCGCGATGCG
CTTCTCGAAT CAACTGCTGA ACAAGCGCCG GTCCTGCTCT TGCGCTTGAG CGCCTCTGTT
CTTGGCATTA TTCAGCACAC TCCAGGTGAT CACGACGCTC CCCCTGGCTC TTCTATCCTG
GTAGAAACGC TCCCAACCGA ACAAGCGCCG GGCCTGCGCT TGCGCTTGAG CATCTCTGTC
CCTGGAATTA TTCAGCAAAC CCCAGGCGAT CGTAACGCTC ACAATGCTTC CCTCGGCTCC
TCTGACGAAT GGGAGCCTGT GGCCACGCGC GCCCTCGCGC AGATCATTGA GCGTCTGAGT
GCGCAGGATC GGGCGCTGTA TGCCGGACTC GGCATCTTTC CCGGCTCGTT CGATGTGGCG
GATGCCCGTC CGGTCCTCGC GCCGATTGTG GACACGGTGG ACGACGAGAA ACTCGATAAC
CTTCGAGCAA TGGGCATCCT GCGTCAGGTC GAGGCGCGTC GTTACGAGGT TCGTCCTTCA
ATTGTGCGCG CCCACGCGCA GGATGCCTTC CGCCAAATGC CGCCCGATCA GCAACAGGCG
GTCGGTGACG CATTCGCCCG TCACTACGCG CAGAAGGCGC AGCAGTACAG CGAGGAATCA
GACGTGACAG CACAGACGCT CTTCGAGCGC GATTGGGCGG CGATCAGCAA GGGCCAGGCG
ATAGCGCTGG AGAGGGCGCC GGATCTTGAT CGTGAACTGG TTATCTATGC CAATGCACGT
TTCTCATACT GGTATATCCT GTACGATGAT CTTTTGCCAT GGCTCGAAGC CGGGCTGGCC
GCTGCGAAAC GGCGCGGTGA TGATGCAAAC AAAGCGCTGC TGCTGGCGCT TCATCGCGCC
ATTGTCGCCG AGCACCAGCA GCAGTGGGCA GAGGCGGCGC AGTGGTATCG GCAGGCGCTC
GATATGCCCG GCGCCGCGCC CGCGACCCGT GCGCGTGTCT GCCTCGGGCT GGGCGTTGTC
GCCGAGCGGC AGCAGCAGTG GGAAGAGGCG GCGCAGTGGT ATCGGCAGGC GCTCGATATG
CCCGGCGCCG CGCCTGATAC CCGCGCGCGT GCTTGCAACG GGCTGGGCGC TGTTGCCGTA
GAACAGCAGC AGTGGGCGGA GGCGGCGCAG TGGTATCGGC AGGCGCTCGA TATGCCCGGC
GCCACGCCTG ACACCCGCGC GCGTGCTTGC AACGGGCTGG GGTATGTCGC CGCAGAACAG
CAGCAGTGGG CGGAGGCGGC GCGGTGGCGT CGGCAGGCGC TCGATATGCC CGGCGCCGCG
CCTGATACCC GCGAGCGTGC CTGCCACGGG CTGGGTGTTG TCGCCGAGCG CCAGCAGCAG
TGGGTGGAGG CGGCGCAGTG GTATCAGCAG GCGCTCGATA TGCCCGGCGC CGCATCCGAC
ACCCGCGCGA CTGCCTGCCA CGGGCTGGGC AATGTCGCCT ATGCTCAGAA GAACGTTCGT
GAGGCGCGAC AGCACTACTC GCGCGCAATC GAGCTTCAGC CGGCAAACGC CATCGCCTAC
CGCAATCGCG GATTAACGTG GGCGGCCGAG AACCCTCCTG ACTATGAGCG GGCGCTCGCG
GATGCCCGGC GCGCGCTCGA GTTGGACTCC GCATATGAAA ATGCGCGCAG GGATGTTGAG
CGGTATGAGC AGGCTCTCAC TGCGCCTGAT ACCCGTGCTC GTGCCTGTCT AGAGCAAGGC
AATGTCGCCG AGCGCCAGCA GCAGTGGGCG GAGGCGGCGC AGTGGTATCA GAAAGCCTTC
GACACGTCTG GCGCTGCCGA TACCCGCGCT GATGCCTGCA TCGGGCTGGG CGATGTCGCC
GCAGCACAGC AGCAGTGGAC GAAGGCAGCG GAGTGGTATG CGCAGGCGCT CGCCATTCCC
GATGCCGCGC CCGCGACCCA CGCTGCTGCC TGCCTCGGGC TGGGTGATGT CGCCTACGCT
CAGAAGAACG TTCGTGAGGC GCGACAACAC TTCTCGCGCG CAATAGAGCT TTGGCCGGCA
CACGCCATCG CCTACCGCAA TCGCGGGTTA ACGTGGGCAG CCGAGGTTCC CCCTGACTAT
GAGCGGGCGC TCGCGGATGC CCGGCGCGCG CTTGAATTGA GTCCCGCGTT TGACGATGCG
CGCAGGGATA TTGAGCGGTA TGAGCAGGCT TTGAAGCAGC AGCAATTGAA TCCGGCGTTT
TTGTATGAGC AGGCATTGAA ACGCGCCCTT GAAGATGCGC GCCGGGATGT TGTATTGAAT
CGCACCCTTG AAGATGCGCG CAGGGATGTT GAGCGGTCTG AGCAGGCTTC GAAGCGACGG
AACCGAAATC GGCCTAATCG AAAGCGCAAC CAGGGCCGAT AG
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| Protein sequence | MSVDMHVRRF PLYVGVVAIV AVIAFVVANA VQLFSDPLRD WIVQMYNADP LRFIVASILI
FAFIAAGAIW IAYQQYRGQQ PENADLSGFK EASTIRLLQL PENLSDDLKA REFIPATRQK
EQRALTDMIL TVPKQSALKA FLHAITFRRL FRPASVPVAV VTGIGGIGKT SLALFTSYDR
RIRQAYPGGR FYFDAAGIYP EHASDTTAQV LFRFLVGAGI DNKQINQALG LPASEEDRAR
QFERLTAQKD DPDVTDFLQR LYVRSLIGKH RLIIIDNPPN TADLSAFEPP EGNALLVITR
PEHPLYKLRR MPQLRLKPMD EPESQRIIKK EWPADQTISW NPDSPDGRSV CQRIHRLGSG
IPLVVLVLSR MLKNEAEDGG SLEAAVRYLS QLEHDHAAGA WTFSAFLNRL LQLPYSAEPN
RATVEEVFRL SYVRLTEDAQ RMFRSLAIFS GLHFDERLAV TVGSGTDETF RQLLRSGLVE
RAPDSQRFYL YDPIALFART LLHQSPDEPQ EVVARYAAFF ADLADQTEAR FRAASDQAER
QAIVSALATE AIHLRRCRDA LLESTAEQAP VLLLRLSASV LGIIQHTPGD HDAPPGSSIL
VETLPTEQAP GLRLRLSISV PGIIQQTPGD RNAHNASLGS SDEWEPVATR ALAQIIERLS
AQDRALYAGL GIFPGSFDVA DARPVLAPIV DTVDDEKLDN LRAMGILRQV EARRYEVRPS
IVRAHAQDAF RQMPPDQQQA VGDAFARHYA QKAQQYSEES DVTAQTLFER DWAAISKGQA
IALERAPDLD RELVIYANAR FSYWYILYDD LLPWLEAGLA AAKRRGDDAN KALLLALHRA
IVAEHQQQWA EAAQWYRQAL DMPGAAPATR ARVCLGLGVV AERQQQWEEA AQWYRQALDM
PGAAPDTRAR ACNGLGAVAV EQQQWAEAAQ WYRQALDMPG ATPDTRARAC NGLGYVAAEQ
QQWAEAARWR RQALDMPGAA PDTRERACHG LGVVAERQQQ WVEAAQWYQQ ALDMPGAASD
TRATACHGLG NVAYAQKNVR EARQHYSRAI ELQPANAIAY RNRGLTWAAE NPPDYERALA
DARRALELDS AYENARRDVE RYEQALTAPD TRARACLEQG NVAERQQQWA EAAQWYQKAF
DTSGAADTRA DACIGLGDVA AAQQQWTKAA EWYAQALAIP DAAPATHAAA CLGLGDVAYA
QKNVREARQH FSRAIELWPA HAIAYRNRGL TWAAEVPPDY ERALADARRA LELSPAFDDA
RRDIERYEQA LKQQQLNPAF LYEQALKRAL EDARRDVVLN RTLEDARRDV ERSEQASKRR
NRNRPNRKRN QGR
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