| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0481 |
|---|
| Symbol | |
|---|
| ID | 5207417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 610191 |
|---|
| End bp | 611168 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640594101 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001274856 |
|---|
| Protein GI | 148654651 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGAAC ATCTGCGTCG CAGCATTCTT GTTTCGCTCG CCCTCGGTCT GTTCGTGGCG
ATTGCGCTGG GGCTTATCAG CGACATCCGC GCTGTGGCGT CCAGTTTTGG CGCGTTCGAC
TGGGGGGTGC TGCCAGCAGT GCTGGGGTTG ACGCTCTTCA ACTATGTGCT GCGCTGGTTG
AAGTGGGATT ATTATCTGCG TCGCATGGGC ATGGGCGATG GTGTCGGGTA TTACGACAGC
GCATTGCTCT TCACCAGTGG CATGGTGATG GCAGTGACGC CCGCCAAGGT CGGCGAGGTG
CTGAAATCAG CGCTGCTGAA ACGGATCAAC GGCACTCCAA TTGCCGCCTC TGCGCCCATC
GTGCTGGCAG AGCGCATCAC CGACGGTCTT GCGATGCTGC TGCTCATGGG TGCAGGGTTG
ACGTTGTATC CGCCAGCGCG CCCGGCGTTT GTGGCGCTGC TGGTTCTGAC AGTGGCCGGG
TTGCTGCTGG TTCAGTCGCA ATCACTGATG CGGCGCGCGC TGACAATACT GGCGCGGTTG
CCGTTTGCCG GCAAAGCGGC GCCGCGCGTG GCAACTGCAT ATGAAAGTAG CCGACAACTC
CTCTCGTGGC GGTTGCTGTT CGTCTCAACG GTTATCAGTG TGGTATCGTG GTTTGGCGAA
TGCGCCGCAA TGTATTATGT GCTGATCGGT CTTGGAATTA CCGGCGAGGC GCTGTTGCTG
AAAGCCACGT TTGTCTTTGC CGCATCGACC CTGTTCGGTC TGGTGTCGTT TCTCCCCGGC
GGTCTGGGGG TGTCGGAAGC GTCAAGCACC GGGTTGCTGG TCTTGCTCGT GCCGATGGCG
GCAGGTCCGG CGACGACTGC AACCATCATT ATCCGTTTCT GCACCCTCTG GTTCGGCGTC
AGTCTGGGGG TGGTCGCGCT GGCGTTGTTC AGCCGACGAT ATGGCGCGCC GGTTGCCGAA
ACGCCGCGAG TGGCGTAG
|
|---|
| Protein sequence | MPEHLRRSIL VSLALGLFVA IALGLISDIR AVASSFGAFD WGVLPAVLGL TLFNYVLRWL
KWDYYLRRMG MGDGVGYYDS ALLFTSGMVM AVTPAKVGEV LKSALLKRIN GTPIAASAPI
VLAERITDGL AMLLLMGAGL TLYPPARPAF VALLVLTVAG LLLVQSQSLM RRALTILARL
PFAGKAAPRV ATAYESSRQL LSWRLLFVST VISVVSWFGE CAAMYYVLIG LGITGEALLL
KATFVFAAST LFGLVSFLPG GLGVSEASST GLLVLLVPMA AGPATTATII IRFCTLWFGV
SLGVVALALF SRRYGAPVAE TPRVA
|
|---|
| |