8 homologs were found in PanDaTox collection
for query gene RoseRS_0385 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_0385  hypothetical protein  100 
 
 
504 aa  1014    Roseiflexus sp. RS-1  Bacteria  normal  0.747749  normal  0.0346302 
 
 
-
 
NC_007333  Tfu_2148  band 7 protein  60.52 
 
 
538 aa  554  1e-156  Thermobifida fusca YX  Bacteria  normal  0.26359  n/a   
 
 
-
 
NC_013595  Sros_2982  hypothetical protein  58.72 
 
 
536 aa  543  1e-153  Streptosporangium roseum DSM 43021  Bacteria  normal  0.688388  normal  0.388989 
 
 
-
 
NC_014210  Ndas_3324  band 7 protein  54.58 
 
 
607 aa  493  9.999999999999999e-139  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876971  normal 
 
 
-
 
NC_014210  Ndas_3323  band 7 protein  29.8 
 
 
488 aa  123  7e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.320912  normal 
 
 
-
 
NC_013595  Sros_2981  Membrane protease subunits stomatin/prohibitin  30.03 
 
 
415 aa  121  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.464072 
 
 
-
 
NC_009523  RoseRS_0384  band 7 protein  28.75 
 
 
411 aa  120  7e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.580095  normal  0.0305659 
 
 
-
 
NC_007333  Tfu_2147  band 7 protein  28.37 
 
 
450 aa  114  5e-24  Thermobifida fusca YX  Bacteria  normal  0.235634  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>