| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0384 |
|---|
| Symbol | |
|---|
| ID | 5207319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 484866 |
|---|
| End bp | 486101 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640594009 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_001274765 |
|---|
| Protein GI | 148654560 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.580095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0305659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGATA CGCGACGTGA ATTTTCCCGT ATTCGTGAGG CAGTAGCAAC CTGGAGCCTC
ATCCGGCAAC TCCTCCGTTC CGGCGAAGAG GGTCAACTGG TACCGGTGGT GATCCCCAAA
GACCGGCGGC GGGCACGCTG GCTTTTCCCA CTGGCAATCA GTTTCTATCT GCTTGGAGTT
GCCGTCTTCA GCGGAGGCAT TTTTGGCGGC CTGGCTCTGT TCCTGTCACT GTTGATGCTC
ATCATAGCAG GTATTTCGTT CTTTCTTGGG GCGATCGTTG AGATCGAACA GGGAACGACC
GGCATTCTCT CGCGCTGGGG GCAGATCGTT GGCGTCATGC CGCCGGGTCG TCACTATCTG
TGGTGGCCAT GGGAAAAGGT CGAAGCGGTG GTTGACACCA GTACCGAGAT TCCCTACACT
GCACCGGTGA TGGCAGCGCC AACCCGCGAA AATGTGCCAC TGAAATCAAT TGAGTTTTTC
TTGAAATTCC GGATTGAAGA CCCGATAGCC TTCGTCCGTC GCCTGGGGGC AAGCAACTTC
GACCTGGTTC TGAGCAGCGC CGTCCAGGAT GCCATTCGCC AGCGGGCGCG ACGGGTCGAA
ACCGAACGTG CTTACGACCT GCGCGGAAGT GACGTCGGCG ATATGCAAGA ACTGCTCAAT
CGGCAGTTGG CCCGTTATGG CGTTCGCATT ACCGGCGCCA ACATTCCCGA CGTCCAGTTG
CCCGATCAAT ACCAGCAGCA TCTGGCCACT CGTGAGCGGG TTGCGAAAGA ATTGCAGGCA
TACGAACGCG AGTGGGAGCT GATCAAAAAG CAGCGGATCG ATACGTTGCT GCTGGAGATC
GAACGCGCCA AAAAGGTACG CGATGCCAAA CTGGTTGAGG TGCGGGAAGC GATTAACAAG
GCTCGCCAGG ATGTTGCCCG CATGCTGCAA GAGAAAGAGA CTGAAGCGCA GCGAGTACGC
TGGGAGATCG AGGCGCGCGG TCGGGCGACT CTGCGTCAGG CTGAGAACGA GGCGCGCAGT
CTGGAATATC TGGGACAGGC CTATCAGGAT AACCGGGCAG TCTTGCAGTA CGAACTGGCC
CGACGCCGCT TACAGGTCGC CGAGACGCTG ATGAAACGCG CACCGCGTCC AATTGTGATC
CAGGGCGATG GTGGCGATAC TTCAGCACTG ACGACGTTGA TCGCGGCGCA GTTGCTGCCC
AAATTGACCG GAAACGCTGA TGGTACAGCA GAGTAA
|
|---|
| Protein sequence | MSDTRREFSR IREAVATWSL IRQLLRSGEE GQLVPVVIPK DRRRARWLFP LAISFYLLGV
AVFSGGIFGG LALFLSLLML IIAGISFFLG AIVEIEQGTT GILSRWGQIV GVMPPGRHYL
WWPWEKVEAV VDTSTEIPYT APVMAAPTRE NVPLKSIEFF LKFRIEDPIA FVRRLGASNF
DLVLSSAVQD AIRQRARRVE TERAYDLRGS DVGDMQELLN RQLARYGVRI TGANIPDVQL
PDQYQQHLAT RERVAKELQA YEREWELIKK QRIDTLLLEI ERAKKVRDAK LVEVREAINK
ARQDVARMLQ EKETEAQRVR WEIEARGRAT LRQAENEARS LEYLGQAYQD NRAVLQYELA
RRRLQVAETL MKRAPRPIVI QGDGGDTSAL TTLIAAQLLP KLTGNADGTA E
|
|---|
| |