Gene RoseRS_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0367 
Symbol 
ID5207302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp466487 
End bp467668 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content61% 
IMG OID640593992 
Producthypothetical protein 
Protein accessionYP_001274748 
Protein GI148654543 
COG category 
COG ID 
TIGRFAM ID[TIGR02674] CRISPR-associated RAMP protein, Csx10 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00107186 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAAA CGATGCTGAT CATCGAGGCG CGCGAACCTC TCGCTTTCCC CGAAAGCAAA 
CCGGGAACCC AGTTTCGTAA AAGCCTGCCG TTCGTGCCGG GCGCCGTGCT CTTTGGCGCT
ATCGGGCAGA CACTGGCGCA TACCGGTCAG TTCGATCCAG ACCTTCTGCG TCGGTTGCGG
TGTCGCAACG CCTACCCGAT GCGTGAGGGG GATGCCTGGG TGCGCCCCTT GCCCGCAACT
GCCATCCATC CCAAAGGCGA CGATCAGCAT ATGCGCGACT CGCTGGTACA GCGGGTTTGC
TGGGAACGGC AACGTCCGCC AGCATTGCTG TACGCCCCTG TTGATGCCGA TGGACGACCG
TGGGAACCGG CTGGTCAGCA GTTCTATACG ATCAGGGACG GCAAACTGGA GAAACGCACC
GTCACGCAGC GCATCCATAC CCGTGTAGCC ATCAACCGAC GACGTGGCAC GGCGGAGGAT
AGCCTGTTGT ACTCCTTCTT TGCCATCAAT GAGACCATCC CCAATACGAC GACGCCGACC
CGTTTCATCG GGAGTCTGGC GCTGGTTGAC TCCGGCGATC CCGAAACATG GGAGAGGGTC
AAGGCGCTGC TCAGGGAGCG GGTTCGTCGT CTCGGCGCGC GCCAGACCAC GGGTATTGGC
GGCGTCACAC TTGACCTTGC GCCGTCTGTT CAAGACCGGA AGGTGCGCGA ACGGGTGGAG
GCGCTGACCG AACAGTTCAA ACGACAGATT GCGCGCTACC GGCAACTCGG CGGCTCATTC
TGGGAACCCG GCGACCGTCA GGTGTTGACC GTCAACCTGA TCTCCGACGC CATCCTGCTG
CGCGATGGGT GGCTCCCGAC CCACGAACTG AGCGCAGATA TGCTCCGCGA TCTGACCGGT
ATCGAGGCAA CGCTCCTGCG TTCCTTCACG ACGACGCGGA TTGTCGGGGG ATGGCAGGCG
CTCTGGCAGC GCCCAAAGAC AACCCATGTC GCGGTGCGGT ACGGCAGTCT CTACGTCTTT
GAAACGGCGC ATGCGCTGAC CGACGAGCAC TATGCTGCGC TGGAACGTCT GGAGCGTGAT
GGCATTGGCG AACGGCGCGC AGAAGGATTT GGGCAGATCC GCATCTGTGA TGATTTTCAT
CTGATCGATT GGGAGGGGAA GCATGGATCA ACAGAGCAGT GA
 
Protein sequence
MSETMLIIEA REPLAFPESK PGTQFRKSLP FVPGAVLFGA IGQTLAHTGQ FDPDLLRRLR 
CRNAYPMREG DAWVRPLPAT AIHPKGDDQH MRDSLVQRVC WERQRPPALL YAPVDADGRP
WEPAGQQFYT IRDGKLEKRT VTQRIHTRVA INRRRGTAED SLLYSFFAIN ETIPNTTTPT
RFIGSLALVD SGDPETWERV KALLRERVRR LGARQTTGIG GVTLDLAPSV QDRKVRERVE
ALTEQFKRQI ARYRQLGGSF WEPGDRQVLT VNLISDAILL RDGWLPTHEL SADMLRDLTG
IEATLLRSFT TTRIVGGWQA LWQRPKTTHV AVRYGSLYVF ETAHALTDEH YAALERLERD
GIGERRAEGF GQIRICDDFH LIDWEGKHGS TEQ