| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0362 |
|---|
| Symbol | |
|---|
| ID | 5207297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 462682 |
|---|
| End bp | 463647 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640593987 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001274743 |
|---|
| Protein GI | 148654538 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00415273 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGG GCCAGCGCAA CAGGGGAAGC GGCGGTGCGC AACCGCTCCC CAAACCGTAT
GATTTCGTTC CGTTTGCGCC GCAGGTCGAG CGCAAGGTGC CTGTCGGACA TCATCGCTAC
CTGCACCTGA GCGGCACGTT GCGGGCGCGT CTGATCGCCC GGTCGCCCGT GCACGTCGCT
TCCGGTCTGC TTACCCAGAG TCGCGATCCG CGTTATCCGT TGATCAAGGC GCATTTCCGT
GCCAACGGGA CGCCGGTCAT TCCGGGAACG TCGCTCAAAG GGTGCATGCG CAGCATCGTC
GAAGCGATTT CTCCTTCTTC AGTCAGCATC ACGCGCGCGC CTCAACTCCC ACGCGATCTC
AAAGCATCGG ATAAAACTAA ACATCTGGAT GTCGCACAAC GCATCTTTGG CGCGCTTGGG
TACCAGGGGC AGATACGCAT CAGCGACGCT GCACTCGACA GAGGTCAGAC CACGATCCAG
GGCACGCCGC AATTGTTCGC TCCTCGACCC AAAGCACCGG TCTATCTGGA CGCAAGAGGG
CAGTTAAGAG GGCGCAAATT CTACATGCAC GGCAGACCGG CGTCCGGCGA CCTGCCGCTG
GAAGTATGTC CGGTCGAGAG CACGTTTACC TTCCGTCTGG ATTTCGAGAA CCTGACGCCA
GGCGAACTGG GGTTGATCCT GATCGCGTTG GGTCTTGGCG AGCCTCGATG GTATCCCAAA
CTGGGGGGTG GAAAACCCGC GTGTCTGGGA ACGATTGAGG TGATCGAGCC ACAGGTTGAG
ATGACAGACG CCGTGACGCA ATGGTATGCC GATGTTGATC CACCGGCAGC GCAGGCGGGA
GACATTCAGA CATTGATTCA GGCAGCGCGC AACGAAGGTC TCGTGTTGGA GGATCAGGTG
CATCGCCTGG CAGACATTCT GCGCTGGCCC CGCGACGACC GCCGCTGCCC GGACAGGAGT
TATTGA
|
|---|
| Protein sequence | MSQGQRNRGS GGAQPLPKPY DFVPFAPQVE RKVPVGHHRY LHLSGTLRAR LIARSPVHVA
SGLLTQSRDP RYPLIKAHFR ANGTPVIPGT SLKGCMRSIV EAISPSSVSI TRAPQLPRDL
KASDKTKHLD VAQRIFGALG YQGQIRISDA ALDRGQTTIQ GTPQLFAPRP KAPVYLDARG
QLRGRKFYMH GRPASGDLPL EVCPVESTFT FRLDFENLTP GELGLILIAL GLGEPRWYPK
LGGGKPACLG TIEVIEPQVE MTDAVTQWYA DVDPPAAQAG DIQTLIQAAR NEGLVLEDQV
HRLADILRWP RDDRRCPDRS Y
|
|---|
| |