| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0325 |
|---|
| Symbol | |
|---|
| ID | 5207260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 415844 |
|---|
| End bp | 416413 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640593951 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001274707 |
|---|
| Protein GI | 148654502 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0365546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTCT CTCGACGTGT ATGGGATCTG CTGCTGATTG CAACATTGCT GACCGGCGGC
GCATTCATCT GGGCGACGCG CATCGCTCCA GTCGCTCCTG CAACGGCGCA GGCGCCAGAA
CCGGCGGCGA CGCAACCTGC GCCGCTCGTC GGGCATCCCG CACCCGGATT TACCCTGAGC
GCTATCGATG GATCGCAGGT TGCACTCGAC GATCTGCGTG GTCAGGTGGT GCTCATTAAT
CTCTGGGCGA CGTGGTGCCC GCCATGTCGC GCCGAAATGC CCGCGATTCA GCAGGCTTAC
GAACGCTTCC GCGATCAGGG TTTTGTTGTG CTGGCGGTGA ATCAACAGGA AGACGCAACG
AAAGTCGTGG CGTATATGAA CGATCAACGT CTGACATTTC CAGCGCTGCT CGATAGCGAC
GCGCGGGTTG GCGCTGCGTA TCAGGCGCGT GTGCTGCCTT CCAGTTTCTT CATTGATCGC
AGGGGGATTG TTCGCGCTGT GTATCGCGGA CCAATGTCGC GTGGTATGAT TGAGGGCACA
ATCGAGCAGT TGATTGCTGA GACACCGTAA
|
|---|
| Protein sequence | MMFSRRVWDL LLIATLLTGG AFIWATRIAP VAPATAQAPE PAATQPAPLV GHPAPGFTLS
AIDGSQVALD DLRGQVVLIN LWATWCPPCR AEMPAIQQAY ERFRDQGFVV LAVNQQEDAT
KVVAYMNDQR LTFPALLDSD ARVGAAYQAR VLPSSFFIDR RGIVRAVYRG PMSRGMIEGT
IEQLIAETP
|
|---|
| |