Gene RoseRS_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0208 
Symbol 
ID5207143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp253010 
End bp254275 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content61% 
IMG OID640593838 
Producthistidine kinase 
Protein accessionYP_001274594 
Protein GI148654389 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.942207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACAAG ATGTGCAGGG CATTGCTGTT GTTCACGTGA ACGGCAACGA AAATGGTAAA 
GAAGCGTCGC TGCCGACGCG TACCGATTAC CTGGGCTGGA TCGCCCGGGC AGGTCTGGCG
CTGACGCGCT GTCGCACCGC AACCGATGCG CTCGACGCGA TGGCGGCACA GCTTGACGCT
GCGCCGTTTT TGCTGCGTGG TTACGTCATT CTGGCGGAGG CGGAAACGCT GCGCCTCAGT
CGGGTGGTAT CGTTTGGACG GGCGCCGACA TTACCGGCGG CATTGCCGCT TGCCGGCAGT
CTTGCTGGCG CTGCCATCGC TGAGAAACGT CTGGTCGTCG CTCCGCCTGC CGCGTCTTCA
ACCGCTGCCT GGGAACGAAC CCTGGCATCA GAATCCACTC TGGTCTGTGC GCCGTTCCAC
GGCGTTGCAT CACGCGGTGT CATCGTTGCC GCGCTGGCTG ACGGCGCGGG TAAGGACGAG
GAATATGGCG CATGTCTCCA GAGTGCGGCA ATGCTGATGT GCTCGACTCT GGATCGCATC
GGCGAGTGTG AAACGCAATT ACGTCAGCGT ATGCGGCAGA TCGATGAGGC GCATACCGGT
CGTCTTGCAC TGATTGGACG TTTGACCGCT GCGCTTGCCC ATGAGATTAA CAATCCGCTT
CAGGCAATTG CCAATACGCT CTATCTGTTA CAGCATCGTC CGTTGAGCGA TGAGAAACGC
CAGCGCTATC TGGGGATGGC GCAGCAGGAG ACGGAGCGTG TGATTGCAAG CGTGCGGCGG
ATGCTCGATC TCTACCGCTC GTCGGGGCAG GGGAAGCGCC CGGTGGCGTT GCACCGCATT
CTTGATCAGG CGATCCAGCA GGCGAGTGAT GTGCTTCGTG AACGCGGGAT CGTTGTGCGA
TGCCTTTATG CGCCGGACGA TCTGCGAGTG TCTGGCTTCG CCGGGCATCT GCGCTTCGCC
TGTTACAATC TGATCCTCAA TTCTGCATAT GCGATGCCCA GGGGGGGGAC ATTGACCATC
CGCACCTGCT GGCAGGATGA TGACACTGCA CCGTCGGTCG TGGTAGAGTT CGCCGATACC
GGCACGCTGG TCGATGAAGC CGATCTGCCG CGTTTATTCG ACCCGGACGG TCCGGTGCGC
GGTGAGGCGA ACGGCATTGA ACTGCCGTTG AGTTACAGCA TCATTGAGCA GCATCACGGT
ACGCTCACGG TCCAGTGCAC TGATGATCAG GTGATCTTCC GCGTATGCCT GCCAGCGGCG
ACGTAG
 
Protein sequence
MTQDVQGIAV VHVNGNENGK EASLPTRTDY LGWIARAGLA LTRCRTATDA LDAMAAQLDA 
APFLLRGYVI LAEAETLRLS RVVSFGRAPT LPAALPLAGS LAGAAIAEKR LVVAPPAASS
TAAWERTLAS ESTLVCAPFH GVASRGVIVA ALADGAGKDE EYGACLQSAA MLMCSTLDRI
GECETQLRQR MRQIDEAHTG RLALIGRLTA ALAHEINNPL QAIANTLYLL QHRPLSDEKR
QRYLGMAQQE TERVIASVRR MLDLYRSSGQ GKRPVALHRI LDQAIQQASD VLRERGIVVR
CLYAPDDLRV SGFAGHLRFA CYNLILNSAY AMPRGGTLTI RTCWQDDDTA PSVVVEFADT
GTLVDEADLP RLFDPDGPVR GEANGIELPL SYSIIEQHHG TLTVQCTDDQ VIFRVCLPAA
T