Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0052 |
Symbol | |
ID | 5206985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 59755 |
End bp | 60903 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640593686 |
Product | peptidase M23B |
Protein accession | YP_001274445 |
Protein GI | 148654240 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.672744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.332961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAT ATTCAGTACG CCCCTTGTGG CGCTGGCTGG CGCTTGTGCT TCTTTTTGTT GCATGCGTGC CCGCCGCACC GCTTGGGGCA GCAGAACACG CTGGCGTCGC CCCTGAACTC TGGTTGCCGA CGCCTCCAGG CGAGCCATGG CGCATCATTC AAGGGTACGC CTGTGGCACG CACAACGGTT GGGATCGCTA CTCACTCGAC CTGGTACGCG CCGACGGTCC CAGTGCCGGT GCGCCGGTGC GCGCCGCTGC CGATGGGGTT ATCTTCGTCT GGGCGCCGCG CAGCGGGACC CTCATTCTGC GTCACGAAGG CAATCTCTAC ACCATGTACA CCCACATGCA ACGCGCCGAG AACCCGCAGG TCGGGCGGAT CGTGGCGCGC GGCGAGGTGA TCGGCGCCGT CGGTGATCGC GGATCGCCGG GCATCGTTCA CCTGCACTTC ACCGCGTTTA CGGCAGAAGG TCCCTGGGCG CGCAATCGAC GATCAGTGCC GCTGCGCTTT GCTGAAGGGT ACGATCTGCC GGAAGTTGGC GGGTGCAGTC AGCATGGCGG GAAGGTGCTG GTCGCCGGGA TCACGCCATT GTCGCATGTC GAAGGGATCG GATTTGCCGG AGCGGAAGTC GGGCGCTGGT ACAGCGGCGA TGTGCGAATC GAGTTCAGCG GGACGGCGAT GGCATCCGGG TATCAGGTGG CATGGGAGCG CGATCCAGGC GGGAGTGCGC CAGACATTGC GGCGCCGAAT GGCAGTGTAC GTCTTTCTGA CGCTGGCGAA GGGTTGCATA CCCTTTTTGT GCGCGGGTGG GACCGGAATG GGCAACAAAC GCTCGCCACA TTCGGTCCGA TCGGGTATGA TCGAACGCCG CCTGAGCCGC CCCCTGCGCT TGCACCGGTC AACATCAAGG CTGAACGTCC GTCGTCGATC TCCTGGGCGC CAGCCGGCGA TGCGGCGTCG GGTGTCGCTG GCTACCGCAT CTATATCGGG AATGATCCTG CGGGTGCGTC GGAATGGTTT ACCCCTCTGC CGGAGATCGA AACCCCGTCG CTCGCACCGG GTGAATACTT CCTGCGCGTG CAACCGATTG ACTATGCCGG TAATGCCGGC GAATGGGTAA CGGTGACCAT GCTGCTGGTT CAGCCGTAA
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Protein sequence | MEAYSVRPLW RWLALVLLFV ACVPAAPLGA AEHAGVAPEL WLPTPPGEPW RIIQGYACGT HNGWDRYSLD LVRADGPSAG APVRAAADGV IFVWAPRSGT LILRHEGNLY TMYTHMQRAE NPQVGRIVAR GEVIGAVGDR GSPGIVHLHF TAFTAEGPWA RNRRSVPLRF AEGYDLPEVG GCSQHGGKVL VAGITPLSHV EGIGFAGAEV GRWYSGDVRI EFSGTAMASG YQVAWERDPG GSAPDIAAPN GSVRLSDAGE GLHTLFVRGW DRNGQQTLAT FGPIGYDRTP PEPPPALAPV NIKAERPSSI SWAPAGDAAS GVAGYRIYIG NDPAGASEWF TPLPEIETPS LAPGEYFLRV QPIDYAGNAG EWVTVTMLLV QP
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