Gene Rmet_6339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6339 
Symbol 
ID4036777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp28609 
End bp29091 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content49% 
IMG OID637975365 
ProductCupin 2 conserved barrel domain-containing protein 
Protein accessionYP_003518263 
Protein GI291434882 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000000399971 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000968106 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACACGG ACCCCCAACA GCGGCGCGTT GCGCCGCCGT TTCGGGCCGG TTATCGGCAA 
CGTAGAACTC TCGGATACAG TTGTTCTGTA ATAACTTCTC AAGCCAAATT GATTTTTGGA
GTGGATATGG AAATGGAATC AAGAATATTT TCGGTAACAG AATATATTCG TCCGTCTGAC
GGCGAACCAA TTCGTTCAGT GGTTCTGGAA ACCAAGGACT CAGCAGTTGT TGTTTGGCAT
GCCCATCCTG GGCAAGAAAT AACCGCTCAT GTTCACCCGG ACGGCCAAGA TACTTGGACG
GTTATCTCTG GAGAGGCTGA GTATTACCAA GGAGGCGGCA AAGTCGCTCA TCTAAAGGCT
GGAGATATTG CCATAGCAAA ACCTGGCCAA GTGCATGGCG CTCTAAATAC TAGTCCAGTG
CCGTTTGTAT TTGTCTCAGT GGTTGCATCT GGCAACGCGG GTTTTGCGTT GGCTGAAAAA
TAG
 
Protein sequence
MNTDPQQRRV APPFRAGYRQ RRTLGYSCSV ITSQAKLIFG VDMEMESRIF SVTEYIRPSD 
GEPIRSVVLE TKDSAVVVWH AHPGQEITAH VHPDGQDTWT VISGEAEYYQ GGGKVAHLKA
GDIAIAKPGQ VHGALNTSPV PFVFVSVVAS GNAGFALAEK