Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_6334 |
Symbol | tnmB |
ID | 4036772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007972 |
Strand | + |
Start bp | 22362 |
End bp | 22931 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637975360 |
Product | protein involved in mobility of Tn6049 |
Protein accession | YP_003518259 |
Protein GI | 291434878 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0000564545 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000732588 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGCCTT TATTGTGTCG AGCAATGAAG GAGACCTCAG CAGTGTGCCA TGCCTTGCTA CAAACGCCAG CGTTTTTTGC CCTGTTGCGC CGGATCGACG AAGACTTGAT GAAGGTGGCG CGAGACAGGG GCTGCTGCCA TTGCGGCTCT GTGCTGCACA GTGCCAACTA TCCGCGTAAG CCGCGCGGAT GCCCACCGGC AGCACACCCG GACTGCAATA CGCGCCTGAG CCTGTGCTGT GCCGGATGCC GCAAACGCAT GACGCCCGAT TCGGTGCGCT TTCTCGGCCG GCGTGTCTGG CTGGCCATTG TCCTGGTACT GCGATCGAGC CGTGCCACTG GCGCCTGCCT GGACGGCCTG CCGGCGATCA GTTGGGCCAC GCTCAAGCGC TGGCGTCAGT GGTGGACCGA GACCTTCCCC AAGACCCCCG TCGGTCGGTG GCTGCGTGGC CTCATCCCGC CAACGCCCGA GCCGTTCATC TATCCCGACT GCCTGCTGCA ATCGGTCGAG CACGACAGCG AAGACGAGCG TCTGGCCGCG GTGTTGCTTC TGCTGCTGGG CCCGGCCTGA
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Protein sequence | MSPLLCRAMK ETSAVCHALL QTPAFFALLR RIDEDLMKVA RDRGCCHCGS VLHSANYPRK PRGCPPAAHP DCNTRLSLCC AGCRKRMTPD SVRFLGRRVW LAIVLVLRSS RATGACLDGL PAISWATLKR WRQWWTETFP KTPVGRWLRG LIPPTPEPFI YPDCLLQSVE HDSEDERLAA VLLLLLGPA
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