| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6133 |
|---|
| Symbol | silD |
|---|
| ID | 4036472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007971 |
|---|
| Strand | - |
|---|
| Start bp | 170023 |
|---|
| End bp | 170418 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | copper/silver resistance transmembrane protein SilD |
|---|
| Protein accession | YP_581942 |
|---|
| Protein GI | 94152535 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.437215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCCT CCTATCGCCG GCACTGGATT GCCGCATTCC TGTTGATTTC GTTCCTGACA
GTTCAACTGG CAGCGGCCGC CTACGCCTGT GAGGGCAGCC GGTATGCGCT GAGCCTGACG
GCGAGCATGA CCGGGATGGC GGAATCCTGT CCGGACATGG CAATCAAGCG GGGCCATTCG
CATGCAGGCC TGTGCCAGGC GCATTGCCAC CAGGACAGCA AATCTGCCGA TCATGCGAGC
CCGCAACTGC CCGTATTCCA GGCGGCCTCG GTTAGCCCGG TAGCCACACC TGACCTGACA
CCGATCCTTG GCGGGTATCG GCTGGCCACG GGCAACCCCG TCCCACGACC GCCTCCCCGC
CCGCTCGCGA TCCTCCATTG CTGTTTCCGC ATTTAG
|
|---|
| Protein sequence | MHASYRRHWI AAFLLISFLT VQLAAAAYAC EGSRYALSLT ASMTGMAESC PDMAIKRGHS
HAGLCQAHCH QDSKSADHAS PQLPVFQAAS VSPVATPDLT PILGGYRLAT GNPVPRPPPR
PLAILHCCFR I
|
|---|
| |