| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6119 |
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| Symbol | copF |
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| ID | 4036401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | + |
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| Start bp | 182396 |
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| End bp | 184813 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | copper efflux ATPase CopF |
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| Protein accession | YP_581928 |
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| Protein GI | 94152521 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.161419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACC GTAGCCCGCT CCCGCCACAC GAGCACTCTG CGCACGGCGG AGCGTCGCCA
GGCGATCATG ACGCGCATCA TGACCATTCG CATGCCGGGC ATAGCTCGCA ATGCGATGGC
AATCGCGCGT CCGAGGCCGA CTTGAAAGAT CCGGTGTGTG GAATGGCCGT ATCGACGGAG
TCAAAATTCC GAGCCGAACA CGATGGCAAG CAGTATTACT TTTGCAGCAA CTCCTGCCAT
CAGAAGTTTC TGCAGGAGCC GGCGAAGTAT GTGGGGGTGA AGACCTCTGA TACCACGGAA
CCGGTTGCCG CGCCGGAAGG GACCATCTAC ACGTGCCCAA TGCACCCGGA GATTCGTCGG
GATCGTCCCG GGAACTGCCC GAAGTGCGGG ATGGCGCTGG AGCCGCTGTT GCCGGATATC
GAGGACGGCG AAAATCCAGA GCTGACGGAT TTTCGACGCC GCTTCTGGTG GACGCTGCCG
CTGACCGCAG TCGTCTTTGT ACTCGCGATG TTCGGGTCTC GGCTGGGCTT GATGTCACCC
GACATGCAAA GCTGGATGGA GTTTGTTCTG GCGACGCCGG TCGTCCTGTG GGCGGGCTGG
CCATTTTTCG AACGCTGCCT GCAATCGTTC GTCAATCGCA GTCCGAACAT GTGGACCCTG
ATTGGGCTGG GAACTGGTGC TGCCTATATC TATAGCGTGG TGGCGACGAT TGCGCCGGGC
GTTTTCCCGC CCGCGTTCGC CGCGCATGGG CGTATTGGCG TGTATTTTGA GGCCGCCGCG
GTCATCATCT CGCTCACCCT GCTCGGGCAG CTTCTTGAGC TCAAGGCGCG CTCGCAGACC
TCCGCCGCAA TCAAATCTCT GCTCGGCCTG GCACCAAAAA CTGCCCGCCG CATTGGCACC
GACGGACAAG AGGAGGATGT GGCCCTGACC CACGTTCACG TGGGAGACCT GTTGCGGGTC
CGGCCCGGCG AAAAAGTACC CGTGGACGGC GTCGTCACGG AAGGTAGCAG CTCCATCGAC
GAATCGATGA TTACGGGCGA GCCGATGCCG GTTTCAAAGC GCGCGGGTGA CCACGTCATT
GGCGCGACGA TCAACACTTC GGGCAGCCTG ATCATTCGGT CGGAGAAGGT CGGTGCGCAG
ACCATGTTGT CCCAGATCGT CCAGATGGTT GCCCAGGCAC AGCGGTCGAA GGCGCCGATG
CAGCGCATGG CGGATCGCGT TGCTGGGGTA TTCGTGCTCG CAGTCATTGG TGTGGCGGCG
GCCACGTTTC TCGCGTGGGG ACTCTTCGGC CCCGAGCCGA GTTGGGTATT TGGCCTGATC
AACGCGGTCG CCGTGCTGAT TATCGCGTGC CCATGCGCGC TTGGATTGGC CACGCCGATG
TCCATCATGG TCGCAAGCGG TAAGGGTGCT GCGAACGGCG TGCTATTTCG GGATGCGGCG
GCGATCGAAA ACCTTCGCAA GGTTACCGCA CTGATTGTGG ACAAGACCGG TACATTGACC
GAGGGCCGAC CCGCCTTTGC GCGATCTGTG GGGATCAACG GCTATGGCGA CGAAGAGGTG
CTGTGGCTCG CCGCAAGTCT TGACCAAGGG AGCGAGCATC CGCTAGCCGC CGCGCTGGTT
TCCGCCGCAC GGGATGCAGG GTTGACCCTG GAGAAGGCAG AAAATTTTGA ATCAAGCACA
GGGATTGGCG TTCGAGGCAA AGTGGGGGGG GAAAGGCTGG CCATTGGCAA CACGGCGCTC
ATGGAGGAGG AGCGTGTCCA GGTTGAGCCG TTGCGTGCGC AAGCCGAGGA CCTGCGCGCA
CAGGGAGCGA GCGTCATGTA TCTGTCCGTT GACGGCACGC TGGCTGGGCT ACTTGCCGTG
TCGGACCCTA TCAAGCACTC GACACCAGAA GCGTTGCAGA GTCTGCGGGA CGAGGGTATC
CGCGTGATCA TGGCCACCGG TGATGGCCTC GCCACAGCGA AAGCGGTGGC CACCAATCTG
AACATTGACG AGTTCCGTGG GGAAGTGAAG CCCGCCGACA AGCTTGCGTT GGTGACGCAA
CTGCAGGACG CTGGCGACGT GGTGGCCATG GCGGGTGACG GGATCAATGA CGCACCTGCA
CTGGCCAAGG CCGATGTGGG TATCGCCATG GGCACCGGGA CCGATGTTGC AATGAACAGC
GCCCAGGTTA CCCTGGTCAA GGGCGATTTG CGCGGCATCG CCCGGGCCCG AAACCTCTCG
GAAGCGACGA TCCGTAACAT GAAGCAAAAC CTGGCATTTG CCTTTGTCTA TAACGCGCTT
GGCGTGCCCT TGGCCGCTGG CGTCCTGTAC CCGTTTACCG GGTTGCTGCT GTCCCCCATG
ATTGCGGCGC TCGCGATGAG CCTGAGTTCC GCATCGGTGA TTTCCAACGC GCTGAGGCTC
AGGCGGACGG CTGTCTGA
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| Protein sequence | MNDRSPLPPH EHSAHGGASP GDHDAHHDHS HAGHSSQCDG NRASEADLKD PVCGMAVSTE
SKFRAEHDGK QYYFCSNSCH QKFLQEPAKY VGVKTSDTTE PVAAPEGTIY TCPMHPEIRR
DRPGNCPKCG MALEPLLPDI EDGENPELTD FRRRFWWTLP LTAVVFVLAM FGSRLGLMSP
DMQSWMEFVL ATPVVLWAGW PFFERCLQSF VNRSPNMWTL IGLGTGAAYI YSVVATIAPG
VFPPAFAAHG RIGVYFEAAA VIISLTLLGQ LLELKARSQT SAAIKSLLGL APKTARRIGT
DGQEEDVALT HVHVGDLLRV RPGEKVPVDG VVTEGSSSID ESMITGEPMP VSKRAGDHVI
GATINTSGSL IIRSEKVGAQ TMLSQIVQMV AQAQRSKAPM QRMADRVAGV FVLAVIGVAA
ATFLAWGLFG PEPSWVFGLI NAVAVLIIAC PCALGLATPM SIMVASGKGA ANGVLFRDAA
AIENLRKVTA LIVDKTGTLT EGRPAFARSV GINGYGDEEV LWLAASLDQG SEHPLAAALV
SAARDAGLTL EKAENFESST GIGVRGKVGG ERLAIGNTAL MEEERVQVEP LRAQAEDLRA
QGASVMYLSV DGTLAGLLAV SDPIKHSTPE ALQSLRDEGI RVIMATGDGL ATAKAVATNL
NIDEFRGEVK PADKLALVTQ LQDAGDVVAM AGDGINDAPA LAKADVGIAM GTGTDVAMNS
AQVTLVKGDL RGIARARNLS EATIRNMKQN LAFAFVYNAL GVPLAAGVLY PFTGLLLSPM
IAALAMSLSS ASVISNALRL RRTAV
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