Gene Rmet_6055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6055 
Symbol 
ID4036609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007971 
Strand
Start bp12363 
End bp13508 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_581864 
Protein GI94152457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACTG AAGAAGTAGC CGAATTCATT CCTGCCGAAG ACGAAGGCGT CGATCCTGTG 
GACACCACTG AGGTTGACGG CTTTGACACC CCTACCGCAA CGGGCAAGCC GTCGGAACTT
GAGCGCATGA GCGCCGAGTT CCTGGACAAT CCCAAGCGCC CGAAGACCTT CATCGATCGG
TTCATCAAAG CGATGTATGC AGATGAGCGT ACGCACAAGA TTTGCCGCGT ACGAGCTCTG
AAGTCTAAGG TCGATCTTGG CGATGTCGAC GAGATCCTGC AGCGAGTAGT GGTAGTCTTC
TTCGCCACCA AGCAACTGGA TAAGCTGCGC GAGGCAAACG CGATCTATGC GGTAATCTAC
GCAATTGCGA GCAATGTTTG CCGGGAGCAC ATTCGTGACG CTCTCGCACT TACCATCAAC
CACGATTCGA TCGAAGAGAT GCGAGAGCGT GGTGAAGAGC TGGAAAATGT TGGCTTGGTA
GACAGCGAAC CAATTGATAG GGACCAGGTC ATCGATTCCA GGACTGCTGC TGCGAAAATG
GCCCTGGCCT TCCGAAGGCA TTTGAATGGA GAAGAGAAAT TGAGCAATCT CGGCGTTTTC
GACCTTGATC CTCTGATTGC GCCCGTCGCG CCGGCGCCCG AATCCGCCGC AGCGGACAAG
AATCTGGAGG CCCTCCCAGC CCCTGCCGCG CCTAAGCCGC GGGTTCGCCG TGCAAACCGC
AACGAGACTC TTTCGGCCGA CCAGCTCGAG TTGGTACAAA TCTGCGCAGA TCTGCAAATG
CGCAACCAGG ACTTTGCCGC AGCACTCGGC ATCGGCCTGC CGCGGCTCTC CTCGTATATC
TACGGCCGCA CGGCCTCGGT GCCGGCAGAC ATTATGACCG CCGCCCGAAA GCTGCGCGAC
GAAGAGCCTG AGGCCATGGC ACGTCGCGAG ATGTTCAATC GGCCGATGAG CGATATCCTT
GGGCGCTGGG CGAACGACCT GCAAGTCGAG TCGGACACCG ATCTTGCTAC CATCCTGGGC
GTCACGAAGA TGACCATCTT CCGGTGGCGT ACGGATGAAA CCAAGCCGGA CAATACTGCA
CTGAACCGAT ATGAGCAGGT TGTCCGGACG TTTAAGAATC GGCTTGCCGC CATCAAGCAG
CGCTAA
 
Protein sequence
MVTEEVAEFI PAEDEGVDPV DTTEVDGFDT PTATGKPSEL ERMSAEFLDN PKRPKTFIDR 
FIKAMYADER THKICRVRAL KSKVDLGDVD EILQRVVVVF FATKQLDKLR EANAIYAVIY
AIASNVCREH IRDALALTIN HDSIEEMRER GEELENVGLV DSEPIDRDQV IDSRTAAAKM
ALAFRRHLNG EEKLSNLGVF DLDPLIAPVA PAPESAAADK NLEALPAPAA PKPRVRRANR
NETLSADQLE LVQICADLQM RNQDFAAALG IGLPRLSSYI YGRTASVPAD IMTAARKLRD
EEPEAMARRE MFNRPMSDIL GRWANDLQVE SDTDLATILG VTKMTIFRWR TDETKPDNTA
LNRYEQVVRT FKNRLAAIKQ R