Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5994 |
Symbol | gntR |
ID | 4036529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007971 |
Strand | + |
Start bp | 63811 |
End bp | 64506 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | GntR-like protein |
Protein accession | YP_581803 |
Protein GI | 94152396 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 75 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.47604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAAA TCGAAGTGAG CCAAGTGGTC CGCACCAATG GGGCGAAGGA GCTCGCCCGC TATCTGGTTG AGGAGATCAG CAATGGGACG TTAGCCGTGG GCATCAAGCT GCCGGCCGAG CGAGAACTCA GCGAAAGATT CAATGCTTCG CGTGGCGCCG TTCGACGGGT CCTGGGAGAG CTGAAAAGCC GTGGACTCAT CACGCAAGTG GTCGGCAGCG GGACCTTTGT GGCCGCGGTG CCAGAGACAA CTCCTGCGGC TGGCAAGGGC ATTGGGGCGA TCAGTCCTGC TGAGTTGATG CAGGCACGGC TCCTGATCGA ACCCATGCTG CCGTCGCTAA TAGTCCAGTA CGGGACGCCG CAGGACTTCG CCCGCATGGA CGAATGTATC GAGCGCTCAG AAGCGGCGAA GACGGTAGAG GAGTTTGAGC ACTGGGACGG GGCTCTGCAT GAAGCCCTTG CTGTGGCGAC GCACAACAAC TTCATTCGGC AGATTCTGGA GCTGGCCACG CAAGTTCGCG AGCAAGGCGA ATGGGGGCGG CTGAAGCAAC GTTCGCTAAC CCCTGAACGG CGCACCACCT ATGAGGACCA GCATCGGGCC CTGGTGAATG CCCTGAAGGA CCGAGACGAG GCTACTGCGC GCCAAGTCAT AGAGCAACAC TTGCTGCAGA TACAACGGAA CTTGTTCGGA CGCTAA
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Protein sequence | MSEIEVSQVV RTNGAKELAR YLVEEISNGT LAVGIKLPAE RELSERFNAS RGAVRRVLGE LKSRGLITQV VGSGTFVAAV PETTPAAGKG IGAISPAELM QARLLIEPML PSLIVQYGTP QDFARMDECI ERSEAAKTVE EFEHWDGALH EALAVATHNN FIRQILELAT QVREQGEWGR LKQRSLTPER RTTYEDQHRA LVNALKDRDE ATARQVIEQH LLQIQRNLFG R
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