Gene Rmet_5937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5937 
Symbol 
ID4042801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp141045 
End bp143852 
Gene Length2808 bp 
Protein Length935 aa 
Translation table11 
GC content68% 
IMG OID637981356 
Producthypothetical protein 
Protein accessionYP_588065 
Protein GI94314856 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.302593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGCG AAGACCATGG TTGGGAAGAG GAAGCCGCGC GCGTGGCCCA CCGCCGTCGC 
GCGCTCGATA TTCCCGAGGT AGCAGGAACC GACGGACGCA ACCGCGCGCT GGCGCTTTCC
GGGGGCGGCA TTCGCAGCGC CACGTTCTGC CTGGGCGTGA TGCAGGCGCT GGCCGAAGCG
CCTGCGCCGG ATGCCACCCC GAATGCCACC CCCGAAGCCA CCCCCGAAGC CACCCCCGAA
GCCACCCCCG AAGCCACCCC CAATACCAGC TCCACACCGG CCGACACCCC GGGCACGCGC
TCGCTGCTGG CCCAGTTCGA CTACCTTTCG ACGGTCAGCG GCGGCGGCTA CATCGGATCG
TTCTTCACCA GCCTGTTCGT GCCGGGCCGT CTGCGCCGTG GCACCAGTCC GCTTCAGGCC
GCGCAGGACG CCTATCGCAC GCTGCAGTAC GAGCCACCGG GCCGTATCCG AACGGGAGAT
GTCTACAGCG ACGCCCCGGG CCGGGCCGCC GTAGCATGGC TACGCGAGAA CGGCCGCTAT
CTCACCCCGA CTGGTGCTGG CGACAACCTG TACGCGGCGG CAGTCATCGT CCGCAACTGG
ATGGCGATGC AATACGTCAT CGGCAGTGCG TTGCTGGTAC TGCTGGCCGC CTTGGCATTG
GGCCTCCACA AGGCCACCGG GACCTGGCCC GGCTTGTGGC AGGGCGAGAT GGACCTCCTG
CATGACGCAC GCCAGGCCAT CAACGACGGC GACCTGGGAA TCTGGTGGAG CTCCTACCTC
TGGATGCCGG TGGCATCCAC CGTGCTGTTC GTGCTACCAC CCGGCATCGC GTACTGGCTC
GTCTATCCCA CATCCGACAA TCCGCAGCAG CCGGTGCGTG CGCTCAACGG CGCCGTCCTG
CTCACGATGC TTCTCGGCGC GCTGTTCCTT GCGGCATCGC TATGGTTCCA GACGATTGAA
CCGAACATGC GCGTTGCCTA CGCCTGTTTC GTGATCGGCC TGCTGGCGTG GCTCGGTGTG
GCCGCCTGCC TGGTCATGCT GATGCCCGCG CCACGCACAG TCACCAACTA CCGTGTGCGC
GCCACGCGGG TACTGCGTGG CGCGATGGGG TTCACGGCGA TGCTGGCCGC GCTGGGCCTG
GCCGACACGG TCGCCCGCAC GTGCTACCTC TACAGCTTCA TGGCGGCGCA CCCATGGGCC
GCGATCGGCC CGGCCGGCGC GCTCGGCGGC CTGGTGTGGC TGGTCCGCTA CGGGGCGACG
CTATTCGACG ACGGCAAGCA GGGCGCCACG GATTCGGTCT GGCGCTCGCT GCTATCCCGG
CTGCCCGTGT CGCTGCTCGC GGGATTGGTC GCCGCACTGG TCGCGCTGCT CGTCTTCGTG
CTGTGGTCCT GGATCGTGCT CTGGGTGCGC TGGGACGGCG GCGAGCCCGT CGACTGGCAT
GTGTTCGGCA AGGCGTGGAC CACCGCCGCG CTCGCCACGC TGACGTTGCT GGCGTTGTGC
ATGGCGATCG TGGTGGGACG CTTCGCGGGC TTCCTGAACT TGTCCACGCT GCAGTCGTTC
TACGCGGCCC GCCTGACGCG GGCTTACCTC GGTGCGTCCA ACGGCAATCG ATTCAGCACC
CCCGCGACGG ACCGCGCGGC ACGCCAGCGC TTCAGCGTGG CCGAGCCCGC GCCGGATGAT
GCGCTCAGCC TCAACGACTA CTACGACCCC CGCGTTCTGG CCCCGCTGCA CCTGATCAAC
GTGACGATGA ACCAGACGGT GGACCCCGCG GAGCAGCTCG TTCAACGCGA CCGCAAGGGC
AAGCCGCTCT GCATCGGCCC TGGACCCGCG CTGGTGCAAC CGGGCAATGC CCAGCAGCTT
CCCGCCGACG CCTACGTACG CTTCACGGTC GACGGGCAAC TCTGCTGCGC GAAATCGCAG
CAGCCCGCCG GCGCCGCTAC ACGTTCGATC GAGATGGCGC AGGCGCGTAC CGTCGGCGAC
TGGATCGCGA TCTCTGGCGC CGCGATCTCC ACGGGCCTCG GGCGCGCCAC GACGCTGGGC
ACGTCGCTAC TGCTCGGGCT GGCCAATCTG CGGCTGGGGA TCTGGTGGCC GTCGAACATG
GCCGAAGGCG GATCGTGCGC AGTACCGTCG GCCATGCGCC GCCCCGATAT CGAACAGCGA
CTGCATCCGG CGTTGGGCGT GATCACAGGT CTGTTCCGCA CGCAGTACTA CCTTGCGTGC
GAACTGGCCG CGCGCTTCCA CGGCACACGG CGACGCTGGC AGTACCTGTC GGACGGCGGG
CACTTCGAGA ACACCGCCAT CTACGAACTG CTGCGCCCCG AGCGCCGTGT CGGCCTGATC
GTCGTCTGTG ACTGCGGTTG CGACGGGGAT TACCGCTTTG GCGATCTTGC CAATCTGATC
CGGCTGGCGC GCATCGACTT CGGGCTTGAG ATCGTTGTCG ATCAGGCGGC GCCGGACGAC
GCCGTTCTGG GCCCGGTATT CGGCACCCCA GACGACTTGG CCGCCAATGC CCCACCCGAG
TCCCGGGACA AGGTCGCCAT CCTGCTCAAC GTCCATATCG CCGGCCAGGC GGGGGCACCC
GACAGCGCGC CGATCACACG CATCGTGCTG CTCAAGCCTC GCCTGACGCC ATCGGCGCCA
GCGGACGTGC GGCAGTACGG CGCAATGCAC CCGGCATTCC CGCAGGAAGG CACGGCCGAC
CAGTTCTTCG ATGAAGCGCA GTGGGAAAGC TATCGTGCGC TCGGCGTGGC CATTGGTCGG
CGCATTGCCA GCGGTGCCGT CGCGTCGCGC TTGTTCAGCC ACGTGTGA
 
Protein sequence
MPGEDHGWEE EAARVAHRRR ALDIPEVAGT DGRNRALALS GGGIRSATFC LGVMQALAEA 
PAPDATPNAT PEATPEATPE ATPEATPNTS STPADTPGTR SLLAQFDYLS TVSGGGYIGS
FFTSLFVPGR LRRGTSPLQA AQDAYRTLQY EPPGRIRTGD VYSDAPGRAA VAWLRENGRY
LTPTGAGDNL YAAAVIVRNW MAMQYVIGSA LLVLLAALAL GLHKATGTWP GLWQGEMDLL
HDARQAINDG DLGIWWSSYL WMPVASTVLF VLPPGIAYWL VYPTSDNPQQ PVRALNGAVL
LTMLLGALFL AASLWFQTIE PNMRVAYACF VIGLLAWLGV AACLVMLMPA PRTVTNYRVR
ATRVLRGAMG FTAMLAALGL ADTVARTCYL YSFMAAHPWA AIGPAGALGG LVWLVRYGAT
LFDDGKQGAT DSVWRSLLSR LPVSLLAGLV AALVALLVFV LWSWIVLWVR WDGGEPVDWH
VFGKAWTTAA LATLTLLALC MAIVVGRFAG FLNLSTLQSF YAARLTRAYL GASNGNRFST
PATDRAARQR FSVAEPAPDD ALSLNDYYDP RVLAPLHLIN VTMNQTVDPA EQLVQRDRKG
KPLCIGPGPA LVQPGNAQQL PADAYVRFTV DGQLCCAKSQ QPAGAATRSI EMAQARTVGD
WIAISGAAIS TGLGRATTLG TSLLLGLANL RLGIWWPSNM AEGGSCAVPS AMRRPDIEQR
LHPALGVITG LFRTQYYLAC ELAARFHGTR RRWQYLSDGG HFENTAIYEL LRPERRVGLI
VVCDCGCDGD YRFGDLANLI RLARIDFGLE IVVDQAAPDD AVLGPVFGTP DDLAANAPPE
SRDKVAILLN VHIAGQAGAP DSAPITRIVL LKPRLTPSAP ADVRQYGAMH PAFPQEGTAD
QFFDEAQWES YRALGVAIGR RIASGAVASR LFSHV