| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5887 |
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| Symbol | leuA1 |
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| ID | 4042751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 83541 |
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| End bp | 85244 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637981306 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_588015 |
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| Protein GI | 94314806 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGT TGCAGGATCC ATCCACCAAA TATCGCCCCG CCACCACCGT CGACTTGCAT
GACCGAACCT GGCCGTCGCG CCAGATCACC CGCGCGCCGC GCTGGATGAG CACCGATCTG
CGCGACGGCA ACCAGGCGCT GATCGAACCG ATGAACAGCG CGCGCAAGCT GCGATTCTTC
GAGCAACTCG TCAAGATCGG GCTCAAGGAA ATCGAAGTGG CATTCCCCTC TGCATCGCAG
ACCGATTTCG ATTTCGTGCG GATGCTGATC GAGGAAGATC GCATCCCCGA GGACGTCAAC
ATCGTCGTGC TGACCCAGGC ACGCGATGAC CTGATCCGCC GCACGGTGGA GTCCGTGCGC
GGCGCCAGGC GCGCGACGGT GCATCTCTAC AACCCGATCG CGCCCGCATG GCGCCGCATC
GTGTTCAATG CATCGCGCGA GGAGATCAAG GAAGTGGCCG TCTCCGGCAC GCGCCTGATC
CGTGAACTGA CCGATGCCAT GCCGGACACC GCATGGACCT ACGAGTACTC GCCCGAAACC
TTCAGCCTGG CCGAACTCGA CTTCTCGCTC GAAGTATCGG ACGCGGTGTC GGCCGTGTGG
GAGCCCGATG CCAACCGACC GATGGTTCTG AATCTTCCGA CCACAGTGGA ATGCAGCACC
ACCAACGTGT TCGCGGACCA GGTCGAATGG ATGCATCGCC GTCTGGCGCG GCGCGAGCAC
ATCGTGCTGT CGGTGCATCC GCACAACGAT CGTGGCACTG CCGTGGCCGC GGCGGAACTG
GCCGTGATGG CCGGTGCCGA TCGCGTGGAA GGCTGTCTGT TCGGCAACGG CGAGCGCACC
GGCAATGTGG ATCTGGTCAC GCTGGCGCTG AACCTGTACA CACAGGGCGT GGACCCGCAA
CTGGACTTCT CCGATATCGA CGAAGTGCGC CAGTGCGTCG AGCACTGCAA TCAGTTGCCT
GTGCACCCGC GTCATCCGTA CGTGGGCGAT CTGGTCTTCA CGGCATTCTC GGGTTCCCAT
CAGGACGCGA TCCGCAAGGG ATTCGCCCAG CAGAAGGACG ACGCGATCTG GGAAGTGCCT
TACCTGCCGA TCGATCCGGC CGATCTCGGC CGCAGCTATG ACGCGGTGAT CCGTGTGAAC
AGCCAGTCCG GCAAGGGCGG CATGGCCTAT CTGCTCGAAC AGATGCACGG CATCTACATG
CCGCGCCGCC TGCAGATCGA GTTCAGTCGG GCGGTGCAAG CCATGACCGA TGAAACCGGG
CTCGAGGCCA GTGCCGCGGA TCTCTACGCA CTGTTCCGCC GCGAGTATCT CGACGTCGAG
GCGCCACTGC GCTACGTATC GCATCGCATG GTATCGGCCA GCGACGCCGC CGCGGAAGTG
GAGATCGATA TCGTGCGCGA TGGTCGTCCG ATGCGCATGC GTGGCACGGG CAATGGTCCG
ATCGATGCGG CAGTGGATGC GTTCACGCGC GGCCTGGGCG TGGCGGTGCG TGTGATGGAC
TATCACGAGC ACGCCATGAC CACCGGCGCC GATGCCAACG CGGCTTGCTA TGTGGAAGTG
CGCGTCGCGG GCTCGATCAC GGGCTTCGGC GCGGGCGTCG ATCCCAGTAT CGTCACAGCG
TCACTGAAGG CCGTGGTCTC CGGTATCAAT CGCCATCTGC AAACCCGCGA CATGTCGGAA
GCCGTGGAGG CCAGGGCGGC CTGA
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| Protein sequence | MPMLQDPSTK YRPATTVDLH DRTWPSRQIT RAPRWMSTDL RDGNQALIEP MNSARKLRFF
EQLVKIGLKE IEVAFPSASQ TDFDFVRMLI EEDRIPEDVN IVVLTQARDD LIRRTVESVR
GARRATVHLY NPIAPAWRRI VFNASREEIK EVAVSGTRLI RELTDAMPDT AWTYEYSPET
FSLAELDFSL EVSDAVSAVW EPDANRPMVL NLPTTVECST TNVFADQVEW MHRRLARREH
IVLSVHPHND RGTAVAAAEL AVMAGADRVE GCLFGNGERT GNVDLVTLAL NLYTQGVDPQ
LDFSDIDEVR QCVEHCNQLP VHPRHPYVGD LVFTAFSGSH QDAIRKGFAQ QKDDAIWEVP
YLPIDPADLG RSYDAVIRVN SQSGKGGMAY LLEQMHGIYM PRRLQIEFSR AVQAMTDETG
LEASAADLYA LFRREYLDVE APLRYVSHRM VSASDAAAEV EIDIVRDGRP MRMRGTGNGP
IDAAVDAFTR GLGVAVRVMD YHEHAMTTGA DANAACYVEV RVAGSITGFG AGVDPSIVTA
SLKAVVSGIN RHLQTRDMSE AVEARAA
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