| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5861 |
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| Symbol | |
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| ID | 4042725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 57827 |
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| End bp | 58756 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637981280 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_587989 |
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| Protein GI | 94314780 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.971396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCT TGCTTATCGA GGAGCATCCA TTGCTCCGGC TCGGGCTGCT GCAGATGCTC
GAGACCATTC AGGAATTCGG CCACGTACTT GCATTGTCGC CAGCTGACGT TGCCCGAACT
GAAGTACCTC ATCGGAATGC CGAACTGCTG GTCTTTGGCA TGCCCGGCGA CCAGGCCTAT
GGATGGGCGC AACTCGAACA GGCGCGCGAG CGTCTGGCGC CTCAACGCAT CCTGGTGCTG
GCCGACGCCT TGCCGCTGCA CGTGCCGAAC GCGGAGGCCG CGCGCGGCAT CTGCGGATGC
CTGCCGAAGT CCACATCGCT GCCCGTGATC GAGGCCGCCA TCCGGCTGAC CATCTCTAGC
GTGCAGGGCC TGATGCTCGC AAGCGAGGTC TGCGCGACGC CATCGGCATC GCGCTCGGCC
ATGCATGCCA CGCAATCGCT GGCATCGGCT GCGCCATTGC CGTTGCCACC GGCCATGCAG
GAGCCGCTTT CGCCCGGCGC TTGCGCCAGC GTCCTGCGCA CCACCGTTGC CGTGCGCGAC
CTCACGAGTC TGCGCCCGGG CCAGCCGATC AGTTCGTCGG CTGCCCCGTT GTCGCCGATG
GTCGAGGAGG AGCCTGGCTA CGACGAAGCA GAGATGCTGC AGATCACGCC GCGCCAGTAC
GAAGTGCTGG TGCTGCTGGC ACGCGGGTAT CCGATCAAAA CCGTCAGCCG GATGCTCAAT
ATCTCGGTGG CCACCGTGAA GAGCCACGCC TGCACGCTTT ATCAGCGCCT CAAGGTTCGT
AACAAGGGAG AAGCCGTGTA TGCGGCATTG CAGCGCGGCG CAACACTTGA GTGGGTCCAT
GGCGACGAAC ACTCGGCTCG CGACGGCGGT GTGCGGCGCG TGATCGCCCG CGGCCCCGAC
GCACAGTACG ACAGCAGCTT GCCTGCCTGA
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| Protein sequence | MNALLIEEHP LLRLGLLQML ETIQEFGHVL ALSPADVART EVPHRNAELL VFGMPGDQAY
GWAQLEQARE RLAPQRILVL ADALPLHVPN AEAARGICGC LPKSTSLPVI EAAIRLTISS
VQGLMLASEV CATPSASRSA MHATQSLASA APLPLPPAMQ EPLSPGACAS VLRTTVAVRD
LTSLRPGQPI SSSAAPLSPM VEEEPGYDEA EMLQITPRQY EVLVLLARGY PIKTVSRMLN
ISVATVKSHA CTLYQRLKVR NKGEAVYAAL QRGATLEWVH GDEHSARDGG VRRVIARGPD
AQYDSSLPA
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